RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 MARCH10Q8NA82 808 aaPredicted RBP7.92□□□□□ -1.14
HCG18-243ENST00000602498 ACSBG1Q96GR2 724 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 COG3Q96JB2 828 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 CRB1P82279 1406 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 PLCH1Q4KWH8 1693 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 TOPAZ1Q8N9V7 1692 aa7.92□□□□□ -1.14
HCG18-243ENST00000602498 COL14A1Q05707 1796 aaKnown RBP7.92□□□□□ -1.14
HCG18-243ENST00000602498 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
HCG18-243ENST00000602498 ABCA3Q99758 1704 aa7.91□□□□□ -1.14
HCG18-243ENST00000602498 SLIT3O75094 1523 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 USP31Q70CQ4 1352 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 HSPA5P11021 654 aaKnown RBP7.9□□□□□ -1.14
HCG18-243ENST00000602498 AMPHP49418 695 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 USHBP1Q8N6Y0 703 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 CAMKK2Q96RR4 588 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 CARD10Q9BWT7 1032 aa7.9□□□□□ -1.14
HCG18-243ENST00000602498 EDC4Q6P2E9 1401 aaKnown RBP7.89□□□□□ -1.15
HCG18-243ENST00000602498 ERBB3P21860 1342 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 EXOC5O00471 708 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 FYB1O15117 783 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 PPM1GO15355 546 aaPredicted RBP7.89□□□□□ -1.15
HCG18-243ENST00000602498 KCNQ2O43526 872 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
HCG18-243ENST00000602498 DDX54Q8TDD1 881 aaKnown RBP7.89□□□□□ -1.15
HCG18-243ENST00000602498 CARD14Q9BXL6 1004 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 NRAPQ86VF7 1730 aa7.89□□□□□ -1.15
HCG18-243ENST00000602498 PHRF1Q9P1Y6 1649 aaKnown RBP7.89□□□□□ -1.15
HCG18-243ENST00000602498 ANKRD36BQ8N2N9 1353 aa7.88□□□□□ -1.15
HCG18-243ENST00000602498 HOXC9P31274 260 aa7.88□□□□□ -1.15
HCG18-243ENST00000602498 CNGB1Q14028 1251 aaPredicted RBP7.88□□□□□ -1.15
HCG18-243ENST00000602498 IP6K1Q92551 441 aa7.88□□□□□ -1.15
HCG18-243ENST00000602498 PUS7Q96PZ0 661 aaKnown RBP7.88□□□□□ -1.15
HCG18-243ENST00000602498 ITSN1Q15811 1721 aa7.88□□□□□ -1.15
HCG18-243ENST00000602498 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.88□□□□□ -1.15
HCG18-243ENST00000602498 PIK3C2AO00443 1686 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 IL2RBP14784 551 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 KCNA4P22459 653 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 HSP90AB2PQ58FF8 381 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 EMILIN1Q9Y6C2 1016 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 NFAT5O94916 1531 aa7.87□□□□□ -1.15
HCG18-243ENST00000602498 OVOS2A0A0J9YW53 1432 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 OVOS2Q6IE36 1432 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 NSD3Q9BZ95 1437 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
HCG18-243ENST00000602498 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 C11orf95C9JLR9 678 aaPredicted RBP7.86□□□□□ -1.15
HCG18-243ENST00000602498 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
HCG18-243ENST00000602498 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 CDCA7Q9BWT1 371 aaPredicted RBP7.86□□□□□ -1.15
HCG18-243ENST00000602498 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
HCG18-243ENST00000602498 NWD2Q9ULI1 1742 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 CRYBG1Q9Y4K1 1723 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 OVOS2A0A0G2JMS6 1433 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
HCG18-243ENST00000602498 CCDC7Q96M83 1385 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 NINLQ9Y2I6 1382 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 KCNQ4P56696 695 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 NBPF6Q5VWK0 638 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 SYTL4Q96C24 671 aaPredicted RBP7.85□□□□□ -1.15
HCG18-243ENST00000602498 NBPF4Q96M43 638 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 PANK3Q9H999 370 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 ANO8Q9HCE9 1232 aaPredicted RBP7.85□□□□□ -1.15
HCG18-243ENST00000602498 LMO7Q8WWI1 1683 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 DISP2A7MBM2 1401 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 EP400Q96L91 3159 aa7.85□□□□□ -1.15
HCG18-243ENST00000602498 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
HCG18-243ENST00000602498 PROM2Q8N271 834 aa7.84□□□□□ -1.15
HCG18-243ENST00000602498 PDGFDQ9GZP0 370 aaPredicted RBP7.84□□□□□ -1.15
HCG18-243ENST00000602498 SRCAPQ6ZRS2 3230 aa7.84□□□□□ -1.16
HCG18-243ENST00000602498 BRWD3Q6RI45 1802 aa7.82□□□□□ -1.16
HCG18-243ENST00000602498 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
HCG18-243ENST00000602498 PRIM1P49642 420 aaKnown RBP7.82□□□□□ -1.16
HCG18-243ENST00000602498 TXNRD1Q16881 649 aa7.82□□□□□ -1.16
HCG18-243ENST00000602498 TNS2Q63HR2 1409 aa7.81□□□□□ -1.16
HCG18-243ENST00000602498 TATP17735 454 aaPredicted RBP7.81□□□□□ -1.16
HCG18-243ENST00000602498 ZCRB1Q8TBF4 217 aaKnown RBP7.81□□□□□ -1.16
HCG18-243ENST00000602498 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
HCG18-243ENST00000602498 ATF5Q9Y2D1 282 aaPredicted RBP7.81□□□□□ -1.16
HCG18-243ENST00000602498 CGNL1Q0VF96 1302 aa7.8□□□□□ -1.16
HCG18-243ENST00000602498 PLSCR1O15162 318 aa7.8□□□□□ -1.16
HCG18-243ENST00000602498 STK32BQ9NY57 414 aa7.8□□□□□ -1.16
HCG18-243ENST00000602498 POLKQ9UBT6 870 aa7.8□□□□□ -1.16
HCG18-243ENST00000602498 MEGF6O75095 1541 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 ZNF827Q17R98 1081 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 MORC1Q86VD1 984 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 PPP1R1BQ9UD71 204 aaPredicted RBP7.79□□□□□ -1.16
HCG18-243ENST00000602498 PARD3Q8TEW0 1356 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 COL18A1P39060 1754 aa7.79□□□□□ -1.16
HCG18-243ENST00000602498 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
HCG18-243ENST00000602498 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
HCG18-243ENST00000602498 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
HCG18-243ENST00000602498 SLC15A2Q16348 729 aa7.78□□□□□ -1.16
HCG18-243ENST00000602498 CC2D1BQ5T0F9 858 aaKnown RBP7.78□□□□□ -1.16
HCG18-243ENST00000602498 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
HCG18-243ENST00000602498 EYA1Q99502 592 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms