RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 SLFN5Q08AF3 891 aa14.47□□□□□ -0.09
PTPN23-206ENST00000602307 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.47□□□□□ -0.09
PTPN23-206ENST00000602307 KIF6Q6ZMV9 814 aa14.47□□□□□ -0.09
PTPN23-206ENST00000602307 CNNM1Q9NRU3 951 aa14.47□□□□□ -0.09
PTPN23-206ENST00000602307 TOM1L2Q6ZVM7 507 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 SRGAP3O43295 1099 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 MCM2P49736 904 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 STK11IPQ8N1F8 1099 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 PDILTQ8N807 584 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 TRIM5Q9C035 493 aa14.46□□□□□ -0.09
PTPN23-206ENST00000602307 R3HCC1Q9Y3T6 440 aaKnown RBP14.46□□□□□ -0.09
PTPN23-206ENST00000602307 PLEKHH2Q8IVE3 1493 aa14.46□□□□□ -0.1
PTPN23-206ENST00000602307 FCHSD2O94868 740 aa14.46□□□□□ -0.1
PTPN23-206ENST00000602307 CT47B1P0C2W7 299 aaPredicted RBP14.46□□□□□ -0.1
PTPN23-206ENST00000602307 ANKRD30BQ9BXX2 1392 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 MBD3O95983 291 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 TMEM57Q8N5G2 664 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 PDCP20941 246 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 NSD3Q9BZ95 1437 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 HIP1O00291 1037 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 GPS2Q13227 327 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 SART3Q15020 963 aaKnown RBP14.45□□□□□ -0.1
PTPN23-206ENST00000602307 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
PTPN23-206ENST00000602307 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 XBP1P17861 261 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 DCTN1Q14203 1278 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 OLFM4Q6UX06 510 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 MPNDQ8N594 471 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 CCDC43Q96MW1 224 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 NUDT16Q96DE0 195 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 BRMS1Q9HCU9 246 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 CCDC61Q9Y6R9 512 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 CCDC158Q5M9N0 1113 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 CYP46A1Q9Y6A2 500 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 NAP1L1P55209 391 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
PTPN23-206ENST00000602307 NAT10Q9H0A0 1025 aaKnown RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
PTPN23-206ENST00000602307 ZC3H6P61129 1189 aaKnown RBP14.43□□□□□ -0.1
PTPN23-206ENST00000602307 NFE2L2Q16236 605 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 ZNF771Q7L3S4 317 aaPredicted RBP14.43□□□□□ -0.1
PTPN23-206ENST00000602307 MCM10Q7L590 875 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 RPGRIP1LQ68CZ1 1315 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 ATAD2Q6PL18 1390 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 K7ELQ4 463 aaPredicted RBP14.43□□□□□ -0.1
PTPN23-206ENST00000602307 AACSQ86V21 672 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 MNS1Q8NEH6 495 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 EXOC6BQ9Y2D4 811 aa14.43□□□□□ -0.1
PTPN23-206ENST00000602307 UGGT2Q9NYU1 1516 aa14.42□□□□□ -0.1
PTPN23-206ENST00000602307 IKQ13123 557 aaPredicted RBP14.42□□□□□ -0.1
PTPN23-206ENST00000602307 PKNOX2Q96KN3 472 aa14.42□□□□□ -0.1
PTPN23-206ENST00000602307 CCDC39Q9UFE4 941 aa14.42□□□□□ -0.1
PTPN23-206ENST00000602307 STK38Q15208 465 aa14.42□□□□□ -0.1
PTPN23-206ENST00000602307 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
PTPN23-206ENST00000602307 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
PTPN23-206ENST00000602307 TSPY26PQ9H489 355 aa14.41□□□□□ -0.1
PTPN23-206ENST00000602307 PRDM11Q9NQV5 511 aa14.41□□□□□ -0.1
PTPN23-206ENST00000602307 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
PTPN23-206ENST00000602307 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPN23-206ENST00000602307 CCDC85AQ96PX6 553 aaPredicted RBP14.41□□□□□ -0.1
PTPN23-206ENST00000602307 SMC2O95347 1197 aa14.4□□□□□ -0.1
PTPN23-206ENST00000602307 SPG7Q9UQ90 795 aa14.4□□□□□ -0.1
PTPN23-206ENST00000602307 KIF14Q15058 1648 aa14.4□□□□□ -0.1
PTPN23-206ENST00000602307 ANKLE2Q86XL3 938 aa14.4□□□□□ -0.1
PTPN23-206ENST00000602307 SSH1Q8WYL5 1049 aa14.4□□□□□ -0.1
PTPN23-206ENST00000602307 NUTM2BA6NNL0 878 aaPredicted RBP14.39□□□□□ -0.11
PTPN23-206ENST00000602307 NUTM2EB1AL46 878 aaPredicted RBP14.39□□□□□ -0.11
PTPN23-206ENST00000602307 NUTM2AQ8IVF1 878 aaPredicted RBP14.39□□□□□ -0.11
PTPN23-206ENST00000602307 SPC24Q8NBT2 197 aa14.39□□□□□ -0.11
PTPN23-206ENST00000602307 CCDC57Q2TAC2 916 aa14.39□□□□□ -0.11
PTPN23-206ENST00000602307 NUTM1Q86Y26 1132 aa14.39□□□□□ -0.11
PTPN23-206ENST00000602307 OFD1O75665 1012 aa14.38□□□□□ -0.11
PTPN23-206ENST00000602307 LARP1BQ659C4 914 aaKnown RBP14.38□□□□□ -0.11
PTPN23-206ENST00000602307 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
PTPN23-206ENST00000602307 CWC22Q9HCG8 908 aaKnown RBP14.38□□□□□ -0.11
PTPN23-206ENST00000602307 BRPF1P55201 1214 aaPredicted RBP14.38□□□□□ -0.11
PTPN23-206ENST00000602307 DUSP27Q5VZP5 1158 aa14.38□□□□□ -0.11
PTPN23-206ENST00000602307 NME9Q86XW9 330 aa14.38□□□□□ -0.11
PTPN23-206ENST00000602307 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
PTPN23-206ENST00000602307 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 JAKMIP1Q96N16 626 aaKnown RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 SMARCA5O60264 1052 aaPredicted RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
PTPN23-206ENST00000602307 ZNF396Q96N95 335 aaPredicted RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■□□ 17
PTPN23-206ENST00000602307 NCOA1Q15788 1441 aa14.37□□□□□ -0.11
PTPN23-206ENST00000602307 ME1P48163 572 aa14.37□□□□□ -0.11
PTPN23-206ENST00000602307 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
PTPN23-206ENST00000602307 MCM4P33991 863 aa14.37□□□□□ -0.11
PTPN23-206ENST00000602307 WDR33Q9C0J8 1336 aaKnown RBP14.37□□□□□ -0.11
PTPN23-206ENST00000602307 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
PTPN23-206ENST00000602307 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
PTPN23-206ENST00000602307 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
PTPN23-206ENST00000602307 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
PTPN23-206ENST00000602307 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms