RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 BRPF3Q9ULD4 1205 aa13.53□□□□□ -0.24
ZNF558-207ENST00000601372 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
ZNF558-207ENST00000601372 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
ZNF558-207ENST00000601372 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.24
ZNF558-207ENST00000601372 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.24
ZNF558-207ENST00000601372 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
ZNF558-207ENST00000601372 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
ZNF558-207ENST00000601372 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
ZNF558-207ENST00000601372 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
ZNF558-207ENST00000601372 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.25
ZNF558-207ENST00000601372 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.25
ZNF558-207ENST00000601372 PHF14O94880 888 aa13.52□□□□□ -0.25
ZNF558-207ENST00000601372 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
ZNF558-207ENST00000601372 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 APPP05067 770 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
ZNF558-207ENST00000601372 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
ZNF558-207ENST00000601372 FYB1O15117 783 aa13.5□□□□□ -0.25
ZNF558-207ENST00000601372 CNNM1Q9NRU3 951 aa13.5□□□□□ -0.25
ZNF558-207ENST00000601372 MCM10Q7L590 875 aa13.5□□□□□ -0.25
ZNF558-207ENST00000601372 ABCC1P33527 1531 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
ZNF558-207ENST00000601372 CHMP5Q9NZZ3 219 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
ZNF558-207ENST00000601372 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 AK7Q96M32 723 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
ZNF558-207ENST00000601372 EIF2AK4Q9P2K8 1649 aaKnown RBP13.49□□□□□ -0.25
ZNF558-207ENST00000601372 FCHSD2O94868 740 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
ZNF558-207ENST00000601372 ADCY10Q96PN6 1610 aa13.48□□□□□ -0.25
ZNF558-207ENST00000601372 NPATQ14207 1427 aa13.48□□□□□ -0.25
ZNF558-207ENST00000601372 FBLN1P23142 703 aa13.48□□□□□ -0.25
ZNF558-207ENST00000601372 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
ZNF558-207ENST00000601372 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 SYAP1Q96A49 352 aaPredicted RBP13.47□□□□□ -0.25
ZNF558-207ENST00000601372 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
ZNF558-207ENST00000601372 KDM5DQ9BY66 1539 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 ARHGEF5Q12774 1597 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
ZNF558-207ENST00000601372 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.25
ZNF558-207ENST00000601372 CHAF1AQ13111 956 aaPredicted RBP13.46□□□□□ -0.25
ZNF558-207ENST00000601372 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
ZNF558-207ENST00000601372 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
ZNF558-207ENST00000601372 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.26
ZNF558-207ENST00000601372 DDB1Q16531 1140 aa13.46□□□□□ -0.26
ZNF558-207ENST00000601372 SLAIN2Q9P270 581 aa13.46□□□□□ -0.26
ZNF558-207ENST00000601372 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
ZNF558-207ENST00000601372 MAGI2Q86UL8 1455 aa13.45□□□□□ -0.26
ZNF558-207ENST00000601372 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
ZNF558-207ENST00000601372 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
ZNF558-207ENST00000601372 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
ZNF558-207ENST00000601372 LTKP29376 864 aa13.44□□□□□ -0.26
ZNF558-207ENST00000601372 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
ZNF558-207ENST00000601372 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
ZNF558-207ENST00000601372 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
ZNF558-207ENST00000601372 TRPM2O94759 1503 aa13.44□□□□□ -0.26
ZNF558-207ENST00000601372 THUMPD2Q9BTF0 503 aaKnown RBP13.44□□□□□ -0.26
ZNF558-207ENST00000601372 KIAA2012Q0VF49 1180 aa13.44□□□□□ -0.26
ZNF558-207ENST00000601372 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-207ENST00000601372 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
ZNF558-207ENST00000601372 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-207ENST00000601372 ANO2Q9NQ90 1003 aa13.43□□□□□ -0.26
ZNF558-207ENST00000601372 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-207ENST00000601372 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
ZNF558-207ENST00000601372 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
ZNF558-207ENST00000601372 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
ZNF558-207ENST00000601372 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
ZNF558-207ENST00000601372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
ZNF558-207ENST00000601372 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZNF558-207ENST00000601372 CDC45O75419 566 aa13.42□□□□□ -0.26
ZNF558-207ENST00000601372 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
ZNF558-207ENST00000601372 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
ZNF558-207ENST00000601372 RFC4P35249 363 aa13.41□□□□□ -0.26
ZNF558-207ENST00000601372 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
ZNF558-207ENST00000601372 SIL1Q9H173 461 aa13.41□□□□□ -0.26
ZNF558-207ENST00000601372 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
ZNF558-207ENST00000601372 USP21Q9UK80 565 aa13.41□□□□□ -0.26
ZNF558-207ENST00000601372 TRAK2O60296 914 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 REC8O95072 547 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 CDC42BPAQ5VT25 1732 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 EFCAB6Q5THR3 1501 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 GNAI3P08754 354 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms