RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 NUCB1Q02818 461 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 CPS1P31327 1500 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 GNAI1P63096 354 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
SMG9-211ENST00000601170 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
SMG9-211ENST00000601170 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
SMG9-211ENST00000601170 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
SMG9-211ENST00000601170 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMG9-211ENST00000601170 COG3Q96JB2 828 aa18.23■□□□□ 0.51
SMG9-211ENST00000601170 ITSN1Q15811 1721 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 C3P01024 1663 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 MBIPQ9NS73 344 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
SMG9-211ENST00000601170 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
SMG9-211ENST00000601170 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
SMG9-211ENST00000601170 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
SMG9-211ENST00000601170 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
SMG9-211ENST00000601170 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
SMG9-211ENST00000601170 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
SMG9-211ENST00000601170 TECPR2O15040 1411 aa18.2■□□□□ 0.5
SMG9-211ENST00000601170 RTN4Q9NQC3 1192 aaKnown RBP18.19■□□□□ 0.5
SMG9-211ENST00000601170 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
SMG9-211ENST00000601170 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
SMG9-211ENST00000601170 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
SMG9-211ENST00000601170 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
SMG9-211ENST00000601170 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
SMG9-211ENST00000601170 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
SMG9-211ENST00000601170 ABCC4O15439 1325 aa18.17■□□□□ 0.5
SMG9-211ENST00000601170 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
SMG9-211ENST00000601170 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
SMG9-211ENST00000601170 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
SMG9-211ENST00000601170 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
SMG9-211ENST00000601170 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
SMG9-211ENST00000601170 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
SMG9-211ENST00000601170 NRKQ7Z2Y5 1582 aa18.15■□□□□ 0.5
SMG9-211ENST00000601170 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
SMG9-211ENST00000601170 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
SMG9-211ENST00000601170 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
SMG9-211ENST00000601170 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
SMG9-211ENST00000601170 BMP2KLQ5H9B9 411 aa18.14■□□□□ 0.49
SMG9-211ENST00000601170 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
SMG9-211ENST00000601170 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
SMG9-211ENST00000601170 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
SMG9-211ENST00000601170 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
SMG9-211ENST00000601170 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
SMG9-211ENST00000601170 TNRQ92752 1358 aa18.12■□□□□ 0.49
SMG9-211ENST00000601170 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
SMG9-211ENST00000601170 TMEM2Q9UHN6 1383 aa18.11■□□□□ 0.49
SMG9-211ENST00000601170 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
SMG9-211ENST00000601170 CHMP5Q9NZZ3 219 aa18.11■□□□□ 0.49
SMG9-211ENST00000601170 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
SMG9-211ENST00000601170 TOPAZ1Q8N9V7 1692 aa18.1■□□□□ 0.49
SMG9-211ENST00000601170 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
SMG9-211ENST00000601170 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
SMG9-211ENST00000601170 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
SMG9-211ENST00000601170 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.49
SMG9-211ENST00000601170 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.49
SMG9-211ENST00000601170 MCM4P33991 863 aa18.08■□□□□ 0.48
SMG9-211ENST00000601170 OVOS2A0A0J9YW53 1432 aa18.08■□□□□ 0.48
SMG9-211ENST00000601170 OVOS2Q6IE36 1432 aa18.08■□□□□ 0.48
SMG9-211ENST00000601170 ACEP12821 1306 aa18.08■□□□□ 0.48
SMG9-211ENST00000601170 NCOA3Q9Y6Q9 1424 aa18.07■□□□□ 0.48
SMG9-211ENST00000601170 KIF24Q5T7B8 1368 aa18.07■□□□□ 0.48
SMG9-211ENST00000601170 PEAK1Q9H792 1746 aa18.07■□□□□ 0.48
SMG9-211ENST00000601170 SNX21Q969T3 373 aa18.06■□□□□ 0.48
SMG9-211ENST00000601170 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
SMG9-211ENST00000601170 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
SMG9-211ENST00000601170 TBC1D9Q6ZT07 1266 aa18.05■□□□□ 0.48
SMG9-211ENST00000601170 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
SMG9-211ENST00000601170 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
SMG9-211ENST00000601170 USP6P35125 1406 aa18.05■□□□□ 0.48
SMG9-211ENST00000601170 MCM10Q7L590 875 aa18.04■□□□□ 0.48
SMG9-211ENST00000601170 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
SMG9-211ENST00000601170 CHL1O00533 1208 aa18.03■□□□□ 0.48
SMG9-211ENST00000601170 HSP90AB2PQ58FF8 381 aa18.03■□□□□ 0.48
SMG9-211ENST00000601170 INTS3Q68E01 1043 aaKnown RBP18.03■□□□□ 0.48
SMG9-211ENST00000601170 KIF2CQ99661 725 aa18.03■□□□□ 0.48
SMG9-211ENST00000601170 RGS12O14924 1447 aa18.03■□□□□ 0.48
SMG9-211ENST00000601170 HAP1P54257 671 aaPredicted RBP18.03■□□□□ 0.48
SMG9-211ENST00000601170 DDIT3P35638 169 aa18.02■□□□□ 0.48
SMG9-211ENST00000601170 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
SMG9-211ENST00000601170 ATP10DQ9P241 1426 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 LTKP29376 864 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 L1TD1Q5T7N2 865 aaKnown RBP18.01■□□□□ 0.47
SMG9-211ENST00000601170 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 SOX12O15370 315 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 HSP90AB1P08238 724 aaKnown RBP18.01■□□□□ 0.47
SMG9-211ENST00000601170 GSPT1P15170 499 aaKnown RBP18.01■□□□□ 0.47
SMG9-211ENST00000601170 USP31Q70CQ4 1352 aa18.01■□□□□ 0.47
SMG9-211ENST00000601170 CDC45O75419 566 aa18■□□□□ 0.47
SMG9-211ENST00000601170 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
SMG9-211ENST00000601170 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
SMG9-211ENST00000601170 MSH6P52701 1360 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms