RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 EIF2AK4Q9P2K8 1649 aaKnown RBP15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 FGD1P98174 961 aa15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 SIL1Q9H173 461 aa15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 CHRNA2Q15822 529 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 HSPA2P54652 639 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 HDGFL1Q5TGJ6 251 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 TNRQ92752 1358 aa15.74■□□□□ 0.11
NOTCH3-206ENST00000601011 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 G2E3Q7L622 706 aa15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 OTUD7AQ8TE49 926 aaPredicted RBP15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 PRR36Q9H6K5 1346 aa15.73■□□□□ 0.11
NOTCH3-206ENST00000601011 GOLGA6L3A6NEY3 463 aa15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 MEIS3Q99687 375 aa15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 DNTTIP2Q5QJE6 756 aaKnown RBP15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 ZMYM4Q5VZL5 1548 aa15.72■□□□□ 0.11
NOTCH3-206ENST00000601011 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 HMMRO75330 724 aa15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 VAMP4O75379 141 aa15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 ORAI2Q96SN7 254 aa15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
NOTCH3-206ENST00000601011 GOLGA6L22H0YM25 854 aa15.7■□□□□ 0.1
NOTCH3-206ENST00000601011 HSP90AA2PQ14568 343 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-206ENST00000601011 UNC13BO14795 1591 aa15.7■□□□□ 0.1
NOTCH3-206ENST00000601011 NUTM1Q86Y26 1132 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 IL13P35225 146 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 FOSBP53539 338 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 EYA1Q99502 592 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 CEP152O94986 1710 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
NOTCH3-206ENST00000601011 PLXNC1O60486 1568 aa15.68■□□□□ 0.1
NOTCH3-206ENST00000601011 ATF3P18847 181 aa15.68■□□□□ 0.1
NOTCH3-206ENST00000601011 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
NOTCH3-206ENST00000601011 PTMAP06454 111 aaKnown RBP15.68■□□□□ 0.1
NOTCH3-206ENST00000601011 UBTFL1P0CB47 393 aaPredicted RBP15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 KIAA1211Q6ZU35 1233 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 RAPGEF4Q8WZA2 1011 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 EVA1CP58658 441 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 MPNDQ8N594 471 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 MADDQ8WXG6 1647 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 KDM4AO75164 1064 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 TBC1D2Q9BYX2 928 aa15.67■□□□□ 0.1
NOTCH3-206ENST00000601011 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 ABCC3O15438 1527 aa15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 SLC39A6Q13433 755 aa15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
NOTCH3-206ENST00000601011 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
NOTCH3-206ENST00000601011 NPHP1O15259 732 aa15.65■□□□□ 0.1
NOTCH3-206ENST00000601011 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
NOTCH3-206ENST00000601011 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 UPF3BQ9BZI7 483 aaKnown RBP15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 MRPL50Q8N5N7 158 aaKnown RBP15.64■□□□□ 0.09
NOTCH3-206ENST00000601011 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 SHROOM2Q13796 1616 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 TTC5Q8N0Z6 440 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 PPFIA3O75145 1194 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
NOTCH3-206ENST00000601011 BCL11BQ9C0K0 894 aaPredicted RBP15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 INSRP06213 1382 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 SRGAP3O43295 1099 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 KCNQ3O43525 872 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 KDM5AP29375 1690 aaKnown RBP15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 NEK4P51957 841 aa15.62■□□□□ 0.09
NOTCH3-206ENST00000601011 SYNMO15061 1565 aa15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 BTBD11A6QL63 1104 aa15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 GNAT3A8MTJ3 354 aa15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 KIDINS220Q9ULH0 1771 aa15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
NOTCH3-206ENST00000601011 TET3O43151 1660 aa15.6■□□□□ 0.09
NOTCH3-206ENST00000601011 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
NOTCH3-206ENST00000601011 NEUROD6Q96NK8 337 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms