RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
PNKP-214ENST00000600573 RRP1P56182 461 aaKnown RBP26.18■■□□□ 1.78
PNKP-214ENST00000600573 NEUROD2Q15784 382 aa26.18■■□□□ 1.78
PNKP-214ENST00000600573 HSP90AB2PQ58FF8 381 aa26.18■■□□□ 1.78
PNKP-214ENST00000600573 SOX12O15370 315 aa26.17■■□□□ 1.78
PNKP-214ENST00000600573 NUTM2GQ5VZR2 741 aa26.17■■□□□ 1.78
PNKP-214ENST00000600573 RRP7AQ9Y3A4 280 aaKnown RBP26.17■■□□□ 1.78
PNKP-214ENST00000600573 ARHGEF10O15013 1369 aa26.16■■□□□ 1.78
PNKP-214ENST00000600573 IL16Q14005 1332 aa26.15■■□□□ 1.78
PNKP-214ENST00000600573 HOXC9P31274 260 aa26.14■■□□□ 1.78
PNKP-214ENST00000600573 RIPK4P57078 832 aa26.14■■□□□ 1.78
PNKP-214ENST00000600573 MYH16Q9H6N6 1097 aa26.14■■□□□ 1.78
PNKP-214ENST00000600573 MARF1Q9Y4F3 1742 aaKnown RBP26.14■■□□□ 1.78
PNKP-214ENST00000600573 USP19O94966 1318 aa26.14■■□□□ 1.77
PNKP-214ENST00000600573 PEAK1Q9H792 1746 aa26.14■■□□□ 1.77
PNKP-214ENST00000600573 XIRP1Q702N8 1843 aaKnown RBP26.14■■□□□ 1.77
PNKP-214ENST00000600573 HMOX1P09601 288 aa26.14■■□□□ 1.77
PNKP-214ENST00000600573 NFE2L2Q16236 605 aa26.14■■□□□ 1.77
PNKP-214ENST00000600573 TRPM3Q9HCF6 1732 aaPredicted RBP26.13■■□□□ 1.77
PNKP-214ENST00000600573 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
PNKP-214ENST00000600573 LMOD3Q0VAK6 560 aa26.13■■□□□ 1.77
PNKP-214ENST00000600573 IP6K1Q92551 441 aa26.13■■□□□ 1.77
PNKP-214ENST00000600573 SLAIN2Q9P270 581 aa26.13■■□□□ 1.77
PNKP-214ENST00000600573 SLIT3O75094 1523 aa26.12■■□□□ 1.77
PNKP-214ENST00000600573 GCP02774 474 aa26.11■■□□□ 1.77
PNKP-214ENST00000600573 NFAT5O94916 1531 aa26.11■■□□□ 1.77
PNKP-214ENST00000600573 SULT6B1Q6IMI4 303 aa26.1■■□□□ 1.77
PNKP-214ENST00000600573 TRIM35Q9UPQ4 493 aa26.1■■□□□ 1.77
PNKP-214ENST00000600573 XPCQ01831 940 aaPredicted RBP26.09■■□□□ 1.77
PNKP-214ENST00000600573 SPINK5Q9NQ38 1064 aaPredicted RBP26.09■■□□□ 1.77
PNKP-214ENST00000600573 BRINP3Q76B58 766 aa26.08■■□□□ 1.77
PNKP-214ENST00000600573 IGSF1Q8N6C5 1336 aa26.08■■□□□ 1.77
PNKP-214ENST00000600573 LMOD2Q6P5Q4 547 aa26.07■■□□□ 1.76
PNKP-214ENST00000600573 PHACTR3Q96KR7 559 aa26.07■■□□□ 1.76
PNKP-214ENST00000600573 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
PNKP-214ENST00000600573 KDRP35968 1356 aa26.07■■□□□ 1.76
PNKP-214ENST00000600573 ARHGEF25Q86VW2 580 aa26.06■■□□□ 1.76
PNKP-214ENST00000600573 RGPD1P0DJD0 1748 aa26.06■■□□□ 1.76
PNKP-214ENST00000600573 PHRF1Q9P1Y6 1649 aaKnown RBP26.06■■□□□ 1.76
PNKP-214ENST00000600573 CT47B1P0C2W7 299 aaPredicted RBP26.06■■□□□ 1.76
PNKP-214ENST00000600573 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.05■■□□□ 1.76
PNKP-214ENST00000600573 TNS3Q68CZ2 1445 aa26.05■■□□□ 1.76
PNKP-214ENST00000600573 EYA1Q99502 592 aa26.04■■□□□ 1.76
PNKP-214ENST00000600573 SPATA31A3Q5VYP0 1347 aa26.04■■□□□ 1.76
PNKP-214ENST00000600573 ALS2Q96Q42 1657 aa26.04■■□□□ 1.76
PNKP-214ENST00000600573 PXDNQ92626 1479 aa26.03■■□□□ 1.76
PNKP-214ENST00000600573 SOS2Q07890 1332 aaPredicted RBP26.01■■□□□ 1.75
PNKP-214ENST00000600573 AEBP1Q8IUX7 1158 aa26■■□□□ 1.75
PNKP-214ENST00000600573 GAS2L2Q8NHY3 880 aa25.98■■□□□ 1.75
PNKP-214ENST00000600573 LTN1O94822 1766 aa25.97■■□□□ 1.75
PNKP-214ENST00000600573 B4GALNT3Q6L9W6 998 aa25.96■■□□□ 1.75
PNKP-214ENST00000600573 GNAI1P63096 354 aa25.96■■□□□ 1.75
PNKP-214ENST00000600573 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
PNKP-214ENST00000600573 IFT57Q9NWB7 429 aa25.96■■□□□ 1.75
PNKP-214ENST00000600573 HTATSF1O43719 755 aaKnown RBP25.95■■□□□ 1.74
PNKP-214ENST00000600573 FANCIQ9NVI1 1328 aa25.93■■□□□ 1.74
PNKP-214ENST00000600573 MED1Q15648 1581 aaPredicted RBP25.93■■□□□ 1.74
PNKP-214ENST00000600573 ABCC6O95255 1503 aa25.92■■□□□ 1.74
PNKP-214ENST00000600573 LTV1Q96GA3 475 aaPredicted RBP25.92■■□□□ 1.74
PNKP-214ENST00000600573 ZNF428Q96B54 188 aa25.92■■□□□ 1.74
PNKP-214ENST00000600573 CCDC136Q96JN2 1154 aa25.92■■□□□ 1.74
PNKP-214ENST00000600573 CPDO75976 1380 aa25.91■■□□□ 1.74
PNKP-214ENST00000600573 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
PNKP-214ENST00000600573 DLG5Q8TDM6 1919 aa25.91■■□□□ 1.74
PNKP-214ENST00000600573 ZNF853P0CG23 659 aa25.9■■□□□ 1.74
PNKP-214ENST00000600573 CFAP44Q96MT7 982 aa25.9■■□□□ 1.74
PNKP-214ENST00000600573 ZBTB7CA1YPR0 619 aa25.89■■□□□ 1.74
PNKP-214ENST00000600573 PLIN1O60240 522 aa25.89■■□□□ 1.74
PNKP-214ENST00000600573 ANKRD24Q8TF21 1146 aa25.88■■□□□ 1.73
PNKP-214ENST00000600573 RTF1Q92541 710 aaKnown RBP25.88■■□□□ 1.73
PNKP-214ENST00000600573 RARSP54136 660 aaKnown RBP25.88■■□□□ 1.73
PNKP-214ENST00000600573 MTHFSDQ2M296 383 aaKnown RBP25.88■■□□□ 1.73
PNKP-214ENST00000600573 NBPF6Q5VWK0 638 aa25.88■■□□□ 1.73
PNKP-214ENST00000600573 NBPF4Q96M43 638 aa25.88■■□□□ 1.73
PNKP-214ENST00000600573 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
PNKP-214ENST00000600573 ZC3H6P61129 1189 aaKnown RBP25.86■■□□□ 1.73
PNKP-214ENST00000600573 EXOSC9Q06265 439 aaKnown RBP25.85■■□□□ 1.73
PNKP-214ENST00000600573 TSR2Q969E8 191 aaKnown RBP25.85■■□□□ 1.73
PNKP-214ENST00000600573 HAP1P54257 671 aaPredicted RBP25.84■■□□□ 1.73
PNKP-214ENST00000600573 AMOTQ4VCS5 1084 aa25.84■■□□□ 1.73
PNKP-214ENST00000600573 CRBNQ96SW2 442 aa25.84■■□□□ 1.73
PNKP-214ENST00000600573 PLEKHG2Q9H7P9 1386 aa25.84■■□□□ 1.73
PNKP-214ENST00000600573 NHSL1Q5SYE7 1610 aa25.83■■□□□ 1.73
PNKP-214ENST00000600573 PDE3AQ14432 1141 aa25.83■■□□□ 1.73
PNKP-214ENST00000600573 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
PNKP-214ENST00000600573 ERBB3P21860 1342 aa25.83■■□□□ 1.73
PNKP-214ENST00000600573 GNAT3A8MTJ3 354 aa25.82■■□□□ 1.72
PNKP-214ENST00000600573 TSHZ2Q9NRE2 1034 aa25.82■■□□□ 1.72
PNKP-214ENST00000600573 BCAR3O75815 825 aa25.81■■□□□ 1.72
PNKP-214ENST00000600573 PLEKHO1Q53GL0 409 aaPredicted RBP25.81■■□□□ 1.72
PNKP-214ENST00000600573 LAS1LQ9Y4W2 734 aaKnown RBP25.81■■□□□ 1.72
PNKP-214ENST00000600573 PLEKHG5O94827 1062 aa25.81■■□□□ 1.72
PNKP-214ENST00000600573 ALDH1L2Q3SY69 923 aa25.81■■□□□ 1.72
PNKP-214ENST00000600573 LRRC59Q96AG4 307 aaKnown RBP25.81■■□□□ 1.72
PNKP-214ENST00000600573 BABAM1Q9NWV8 329 aa25.81■■□□□ 1.72
PNKP-214ENST00000600573 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
PNKP-214ENST00000600573 MS4A1P11836 297 aa25.8■■□□□ 1.72
PNKP-214ENST00000600573 THUMPD2Q9BTF0 503 aaKnown RBP25.8■■□□□ 1.72
PNKP-214ENST00000600573 CHL1O00533 1208 aa25.79■■□□□ 1.72
PNKP-214ENST00000600573 CABLES1Q8TDN4 633 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms