RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 RBM42Q9BTD8 480 aaKnown RBP24.05■■□□□ 1.44
ARHGEF1-218ENST00000599589 SRPK2P78362 688 aaKnown RBP24.04■■□□□ 1.44
ARHGEF1-218ENST00000599589 BMP2KLQ5H9B9 411 aa24.03■■□□□ 1.44
ARHGEF1-218ENST00000599589 NSD2O96028 1365 aa24.03■■□□□ 1.44
ARHGEF1-218ENST00000599589 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
ARHGEF1-218ENST00000599589 RIMS2Q9UQ26 1411 aa24.02■■□□□ 1.44
ARHGEF1-218ENST00000599589 GAS2L2Q8NHY3 880 aa24.02■■□□□ 1.44
ARHGEF1-218ENST00000599589 ANP32BQ92688 251 aaKnown RBP24.02■■□□□ 1.44
ARHGEF1-218ENST00000599589 DDX49Q9Y6V7 483 aaKnown RBP24.02■■□□□ 1.44
ARHGEF1-218ENST00000599589 AK9Q5TCS8 1911 aa24.02■■□□□ 1.44
ARHGEF1-218ENST00000599589 GOLGA6L22H0YM25 854 aa24.01■■□□□ 1.43
ARHGEF1-218ENST00000599589 TMPOP42166 694 aaKnown RBP24.01■■□□□ 1.43
ARHGEF1-218ENST00000599589 ATAD2Q6PL18 1390 aa24.01■■□□□ 1.43
ARHGEF1-218ENST00000599589 MINK1Q8N4C8 1332 aaPredicted RBP24.01■■□□□ 1.43
ARHGEF1-218ENST00000599589 OFD1O75665 1012 aa24.01■■□□□ 1.43
ARHGEF1-218ENST00000599589 U2SURPO15042 1029 aaKnown RBP24■■□□□ 1.43
ARHGEF1-218ENST00000599589 MSNP26038 577 aaKnown RBP24■■□□□ 1.43
ARHGEF1-218ENST00000599589 KLHL40Q2TBA0 621 aa23.99■■□□□ 1.43
ARHGEF1-218ENST00000599589 ANKRD45Q5TZF3 282 aa23.99■■□□□ 1.43
ARHGEF1-218ENST00000599589 PLEKHF1Q96S99 279 aa23.99■■□□□ 1.43
ARHGEF1-218ENST00000599589 TBC1D9Q6ZT07 1266 aa23.98■■□□□ 1.43
ARHGEF1-218ENST00000599589 ABCC11Q96J66 1382 aa23.98■■□□□ 1.43
ARHGEF1-218ENST00000599589 BAG4O95429 457 aaKnown RBP23.98■■□□□ 1.43
ARHGEF1-218ENST00000599589 KIF16BQ96L93 1317 aa23.98■■□□□ 1.43
ARHGEF1-218ENST00000599589 IPO8O15397 1037 aaKnown RBP23.97■■□□□ 1.43
ARHGEF1-218ENST00000599589 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
ARHGEF1-218ENST00000599589 IBTKQ9P2D0 1353 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF1-218ENST00000599589 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.96■■□□□ 1.43
ARHGEF1-218ENST00000599589 CLEC17AQ6ZS10 378 aa23.96■■□□□ 1.43
ARHGEF1-218ENST00000599589 A0A1W2PP64 1363 aa23.96■■□□□ 1.43
ARHGEF1-218ENST00000599589 TERF2IPQ9NYB0 399 aa23.96■■□□□ 1.43
ARHGEF1-218ENST00000599589 RBM10P98175 930 aaKnown RBP23.95■■□□□ 1.42
ARHGEF1-218ENST00000599589 RIPK4P57078 832 aa23.94■■□□□ 1.42
ARHGEF1-218ENST00000599589 CDK19Q9BWU1 502 aa23.94■■□□□ 1.42
ARHGEF1-218ENST00000599589 DLC1Q96QB1 1528 aa23.93■■□□□ 1.42
ARHGEF1-218ENST00000599589 C1orf115Q9H7X2 142 aa23.93■■□□□ 1.42
ARHGEF1-218ENST00000599589 NCLP19338 710 aaKnown RBP23.92■■□□□ 1.42
ARHGEF1-218ENST00000599589 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
ARHGEF1-218ENST00000599589 IL16Q14005 1332 aa23.92■■□□□ 1.42
ARHGEF1-218ENST00000599589 PPIP5K1Q6PFW1 1433 aa23.92■■□□□ 1.42
ARHGEF1-218ENST00000599589 MCTP1Q6DN14 999 aa23.92■■□□□ 1.42
ARHGEF1-218ENST00000599589 ZNF445P59923 1031 aa23.91■■□□□ 1.42
ARHGEF1-218ENST00000599589 CAVIN1Q6NZI2 390 aaKnown RBP23.91■■□□□ 1.42
ARHGEF1-218ENST00000599589 GCC1Q96CN9 775 aa23.9■■□□□ 1.42
ARHGEF1-218ENST00000599589 R3HCC1Q9Y3T6 440 aaKnown RBP23.9■■□□□ 1.42
ARHGEF1-218ENST00000599589 TNRQ92752 1358 aa23.89■■□□□ 1.42
ARHGEF1-218ENST00000599589 ZSCAN23Q3MJ62 389 aa23.89■■□□□ 1.41
ARHGEF1-218ENST00000599589 ALDH1L2Q3SY69 923 aa23.89■■□□□ 1.41
ARHGEF1-218ENST00000599589 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.41
ARHGEF1-218ENST00000599589 TERF1P54274 439 aa23.88■■□□□ 1.41
ARHGEF1-218ENST00000599589 CALD1Q05682 793 aaKnown RBP23.88■■□□□ 1.41
ARHGEF1-218ENST00000599589 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
ARHGEF1-218ENST00000599589 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
ARHGEF1-218ENST00000599589 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
ARHGEF1-218ENST00000599589 ZBTB7BO15156 539 aaPredicted RBP23.87■■□□□ 1.41
ARHGEF1-218ENST00000599589 RBSNQ9H1K0 784 aa23.87■■□□□ 1.41
ARHGEF1-218ENST00000599589 MED14O60244 1454 aa23.86■■□□□ 1.41
ARHGEF1-218ENST00000599589 CDC45O75419 566 aa23.86■■□□□ 1.41
ARHGEF1-218ENST00000599589 FAM13BQ9NYF5 915 aa23.86■■□□□ 1.41
ARHGEF1-218ENST00000599589 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 LMBRD1Q9NUN5 540 aa23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 CABP1Q9NZU7 370 aa23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 NOL7Q9UMY1 257 aaKnown RBP23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 FYB1O15117 783 aa23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 HS1BP3Q53T59 392 aa23.85■■□□□ 1.41
ARHGEF1-218ENST00000599589 XPCQ01831 940 aaPredicted RBP23.84■■□□□ 1.41
ARHGEF1-218ENST00000599589 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.84■■□□□ 1.41
ARHGEF1-218ENST00000599589 PKP1Q13835 747 aa23.83■■□□□ 1.41
ARHGEF1-218ENST00000599589 SIRT2Q8IXJ6 389 aa23.83■■□□□ 1.41
ARHGEF1-218ENST00000599589 NRXN3Q9Y4C0 1643 aa23.83■■□□□ 1.41
ARHGEF1-218ENST00000599589 NUCB2P80303 420 aa23.83■■□□□ 1.41
ARHGEF1-218ENST00000599589 METP08581 1390 aa23.82■■□□□ 1.4
ARHGEF1-218ENST00000599589 ZNF500O60304 480 aaPredicted RBP23.82■■□□□ 1.4
ARHGEF1-218ENST00000599589 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
ARHGEF1-218ENST00000599589 RABEP1Q15276 862 aa23.82■■□□□ 1.4
ARHGEF1-218ENST00000599589 PDLIM2Q96JY6 352 aa23.82■■□□□ 1.4
ARHGEF1-218ENST00000599589 CYP2E1P05181 493 aaPredicted RBP23.81■■□□□ 1.4
ARHGEF1-218ENST00000599589 GSPT1P15170 499 aaKnown RBP23.81■■□□□ 1.4
ARHGEF1-218ENST00000599589 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
ARHGEF1-218ENST00000599589 TMEM2Q9UHN6 1383 aa23.8■■□□□ 1.4
ARHGEF1-218ENST00000599589 UQCRHLA0A096LP55 91 aa23.8■■□□□ 1.4
ARHGEF1-218ENST00000599589 UQCRHP07919 91 aa23.8■■□□□ 1.4
ARHGEF1-218ENST00000599589 RBM27Q9P2N5 1060 aaKnown RBP23.8■■□□□ 1.4
ARHGEF1-218ENST00000599589 PRPF40AO75400 957 aaKnown RBP23.78■■□□□ 1.4
ARHGEF1-218ENST00000599589 CHMP4BQ9H444 224 aaKnown RBP23.78■■□□□ 1.4
ARHGEF1-218ENST00000599589 BRPF1P55201 1214 aaPredicted RBP23.78■■□□□ 1.4
ARHGEF1-218ENST00000599589 MAP7D2Q96T17 732 aa23.78■■□□□ 1.4
ARHGEF1-218ENST00000599589 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
ARHGEF1-218ENST00000599589 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
ARHGEF1-218ENST00000599589 GPT2Q8TD30 523 aa23.77■■□□□ 1.4
ARHGEF1-218ENST00000599589 ATP7BP35670 1465 aa23.77■■□□□ 1.4
ARHGEF1-218ENST00000599589 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
ARHGEF1-218ENST00000599589 FAM135BQ49AJ0 1406 aa23.76■■□□□ 1.39
ARHGEF1-218ENST00000599589 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
ARHGEF1-218ENST00000599589 DIAPH1O60610 1272 aaKnown RBP23.76■■□□□ 1.39
ARHGEF1-218ENST00000599589 ZKSCAN5Q9Y2L8 839 aa23.76■■□□□ 1.39
ARHGEF1-218ENST00000599589 TECPR2O15040 1411 aa23.75■■□□□ 1.39
ARHGEF1-218ENST00000599589 PLEKHM2Q8IWE5 1019 aa23.75■■□□□ 1.39
ARHGEF1-218ENST00000599589 UBR1Q8IWV7 1749 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms