RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 NUCB1Q02818 461 aa13.89□□□□□ -0.19
ZNF544-213ENST00000599227 JARID2Q92833 1246 aaPredicted RBP13.89□□□□□ -0.19
ZNF544-213ENST00000599227 MYOM1P52179 1685 aa13.89□□□□□ -0.19
ZNF544-213ENST00000599227 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
ZNF544-213ENST00000599227 DDX49Q9Y6V7 483 aaKnown RBP13.88□□□□□ -0.19
ZNF544-213ENST00000599227 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
ZNF544-213ENST00000599227 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
ZNF544-213ENST00000599227 VAMP4O75379 141 aa13.88□□□□□ -0.19
ZNF544-213ENST00000599227 PIP4K2AP48426 406 aaPredicted RBP13.88□□□□□ -0.19
ZNF544-213ENST00000599227 IL1RAPL2Q9NP60 686 aa13.88□□□□□ -0.19
ZNF544-213ENST00000599227 FCHSD2O94868 740 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
ZNF544-213ENST00000599227 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 AAMPQ13685 434 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 RPGRIP1LQ68CZ1 1315 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
ZNF544-213ENST00000599227 CEP152O94986 1710 aa13.86□□□□□ -0.19
ZNF544-213ENST00000599227 GNAI1P63096 354 aa13.86□□□□□ -0.19
ZNF544-213ENST00000599227 GRPEL1Q9HAV7 217 aa13.86□□□□□ -0.19
ZNF544-213ENST00000599227 PSME1Q06323 249 aa13.86□□□□□ -0.19
ZNF544-213ENST00000599227 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
ZNF544-213ENST00000599227 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
ZNF544-213ENST00000599227 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF544-213ENST00000599227 TET3O43151 1660 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 KCNJ4P48050 445 aa13.85□□□□□ -0.19
ZNF544-213ENST00000599227 MRPL50Q8N5N7 158 aaKnown RBP13.84□□□□□ -0.19
ZNF544-213ENST00000599227 KIF1BO60333 1816 aa13.84□□□□□ -0.19
ZNF544-213ENST00000599227 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
ZNF544-213ENST00000599227 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
ZNF544-213ENST00000599227 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.19
ZNF544-213ENST00000599227 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.19
ZNF544-213ENST00000599227 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.19
ZNF544-213ENST00000599227 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
ZNF544-213ENST00000599227 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
ZNF544-213ENST00000599227 ANP32BQ92688 251 aaKnown RBP13.83□□□□□ -0.2
ZNF544-213ENST00000599227 SBNO2Q9Y2G9 1366 aa13.83□□□□□ -0.2
ZNF544-213ENST00000599227 MYOM2P54296 1465 aa13.83□□□□□ -0.2
ZNF544-213ENST00000599227 YEATS2Q9ULM3 1422 aa13.83□□□□□ -0.2
ZNF544-213ENST00000599227 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
ZNF544-213ENST00000599227 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
ZNF544-213ENST00000599227 CDC45O75419 566 aa13.82□□□□□ -0.2
ZNF544-213ENST00000599227 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
ZNF544-213ENST00000599227 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
ZNF544-213ENST00000599227 NLRP1Q9C000 1473 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 MRE11P49959 708 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 FOSBP53539 338 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 PKP1Q13835 747 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 MEIS3Q99687 375 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
ZNF544-213ENST00000599227 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
ZNF544-213ENST00000599227 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
ZNF544-213ENST00000599227 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
ZNF544-213ENST00000599227 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 KDM4AO75164 1064 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 BMP2KLQ5H9B9 411 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
ZNF544-213ENST00000599227 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
ZNF544-213ENST00000599227 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
ZNF544-213ENST00000599227 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 SIL1Q9H173 461 aa13.8□□□□□ -0.2
ZNF544-213ENST00000599227 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
ZNF544-213ENST00000599227 ACEP12821 1306 aa13.79□□□□□ -0.2
ZNF544-213ENST00000599227 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
ZNF544-213ENST00000599227 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
ZNF544-213ENST00000599227 TEFQ10587 303 aa13.79□□□□□ -0.2
ZNF544-213ENST00000599227 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
ZNF544-213ENST00000599227 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
ZNF544-213ENST00000599227 PPIP5K1Q6PFW1 1433 aa13.79□□□□□ -0.2
ZNF544-213ENST00000599227 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
ZNF544-213ENST00000599227 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
ZNF544-213ENST00000599227 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
ZNF544-213ENST00000599227 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
ZNF544-213ENST00000599227 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
ZNF544-213ENST00000599227 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
ZNF544-213ENST00000599227 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
ZNF544-213ENST00000599227 NSD2O96028 1365 aa13.77□□□□□ -0.2
ZNF544-213ENST00000599227 MYL6BP14649 208 aa13.77□□□□□ -0.2
ZNF544-213ENST00000599227 CASC1Q6TDU7 716 aa13.77□□□□□ -0.2
ZNF544-213ENST00000599227 G2E3Q7L622 706 aa13.77□□□□□ -0.2
ZNF544-213ENST00000599227 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.2
ZNF544-213ENST00000599227 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
ZNF544-213ENST00000599227 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
ZNF544-213ENST00000599227 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
ZNF544-213ENST00000599227 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
ZNF544-213ENST00000599227 ESPNB1AK53 854 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
ZNF544-213ENST00000599227 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 IL13P35225 146 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 NEK4P51957 841 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms