RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
LINC00343-207ENST00000599179 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
LINC00343-207ENST00000599179 IGF1RP08069 1367 aa12.3□□□□□ -0.44
LINC00343-207ENST00000599179 WIPF1O43516 503 aa12.29□□□□□ -0.44
LINC00343-207ENST00000599179 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
LINC00343-207ENST00000599179 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
LINC00343-207ENST00000599179 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
LINC00343-207ENST00000599179 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-207ENST00000599179 CUL7Q14999 1698 aa12.28□□□□□ -0.44
LINC00343-207ENST00000599179 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
LINC00343-207ENST00000599179 PTPRMP28827 1452 aa12.27□□□□□ -0.45
LINC00343-207ENST00000599179 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
LINC00343-207ENST00000599179 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
LINC00343-207ENST00000599179 VARSP26640 1264 aaKnown RBP12.26□□□□□ -0.45
LINC00343-207ENST00000599179 MPNDQ8N594 471 aa12.25□□□□□ -0.45
LINC00343-207ENST00000599179 ZNF511Q8NB15 262 aa12.25□□□□□ -0.45
LINC00343-207ENST00000599179 KIF21BO75037 1637 aa12.24□□□□□ -0.45
LINC00343-207ENST00000599179 BAP1Q92560 729 aa12.24□□□□□ -0.45
LINC00343-207ENST00000599179 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
LINC00343-207ENST00000599179 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
LINC00343-207ENST00000599179 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
LINC00343-207ENST00000599179 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
LINC00343-207ENST00000599179 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-207ENST00000599179 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
LINC00343-207ENST00000599179 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
LINC00343-207ENST00000599179 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
LINC00343-207ENST00000599179 LYPD8Q6UX82 237 aa12.21□□□□□ -0.45
LINC00343-207ENST00000599179 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.45
LINC00343-207ENST00000599179 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
LINC00343-207ENST00000599179 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
LINC00343-207ENST00000599179 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
LINC00343-207ENST00000599179 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
LINC00343-207ENST00000599179 NPAS3Q8IXF0 933 aa12.2□□□□□ -0.46
LINC00343-207ENST00000599179 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
LINC00343-207ENST00000599179 SPTLC1O15269 473 aa12.19□□□□□ -0.46
LINC00343-207ENST00000599179 BMP1P13497 986 aa12.19□□□□□ -0.46
LINC00343-207ENST00000599179 CTHP32929 405 aa12.19□□□□□ -0.46
LINC00343-207ENST00000599179 HSPA2P54652 639 aa12.19□□□□□ -0.46
LINC00343-207ENST00000599179 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
LINC00343-207ENST00000599179 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
LINC00343-207ENST00000599179 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
LINC00343-207ENST00000599179 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
LINC00343-207ENST00000599179 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
LINC00343-207ENST00000599179 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
LINC00343-207ENST00000599179 AK7Q96M32 723 aa12.18□□□□□ -0.46
LINC00343-207ENST00000599179 NXF1Q9UBU9 619 aaKnown RBP12.18□□□□□ -0.46
LINC00343-207ENST00000599179 TRIM66O15016 1216 aa12.17□□□□□ -0.46
LINC00343-207ENST00000599179 FAM174AQ8TBP5 190 aa12.17□□□□□ -0.46
LINC00343-207ENST00000599179 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
LINC00343-207ENST00000599179 NNTQ13423 1086 aa12.16□□□□□ -0.46
LINC00343-207ENST00000599179 HRCP23327 699 aa12.15□□□□□ -0.46
LINC00343-207ENST00000599179 CFAP99D6REC4 459 aa12.14□□□□□ -0.47
LINC00343-207ENST00000599179 ADH1CP00326 375 aa12.14□□□□□ -0.47
LINC00343-207ENST00000599179 RIC3Q7Z5B4 369 aa12.14□□□□□ -0.47
LINC00343-207ENST00000599179 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
LINC00343-207ENST00000599179 ARID4BQ4LE39 1312 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-207ENST00000599179 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
LINC00343-207ENST00000599179 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-207ENST00000599179 SCARF1Q14162 830 aa12.12□□□□□ -0.47
LINC00343-207ENST00000599179 LCE2CQ5TA81 110 aa12.12□□□□□ -0.47
LINC00343-207ENST00000599179 IRF7Q92985 503 aa12.12□□□□□ -0.47
LINC00343-207ENST00000599179 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
LINC00343-207ENST00000599179 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
LINC00343-207ENST00000599179 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 MRPL14Q6P1L8 145 aaKnown RBP12.1□□□□□ -0.47
LINC00343-207ENST00000599179 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 MAP10Q9P2G4 905 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
LINC00343-207ENST00000599179 KIAA0556O60303 1618 aa12.09□□□□□ -0.47
LINC00343-207ENST00000599179 TIMP2P16035 220 aa12.09□□□□□ -0.47
LINC00343-207ENST00000599179 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
LINC00343-207ENST00000599179 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
LINC00343-207ENST00000599179 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
LINC00343-207ENST00000599179 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-207ENST00000599179 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
LINC00343-207ENST00000599179 NR5A1Q13285 461 aa12.07□□□□□ -0.48
LINC00343-207ENST00000599179 AGERQ15109 404 aa12.07□□□□□ -0.48
LINC00343-207ENST00000599179 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
LINC00343-207ENST00000599179 H3BM21 787 aa12.06□□□□□ -0.48
LINC00343-207ENST00000599179 CABLES1Q8TDN4 633 aa12.06□□□□□ -0.48
LINC00343-207ENST00000599179 FOXJ1Q92949 421 aa12.06□□□□□ -0.48
LINC00343-207ENST00000599179 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-207ENST00000599179 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-207ENST00000599179 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
LINC00343-207ENST00000599179 CSPP1Q1MSJ5 1256 aa12.05□□□□□ -0.48
LINC00343-207ENST00000599179 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-207ENST00000599179 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
LINC00343-207ENST00000599179 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-207ENST00000599179 ARID3CA6NKF2 412 aa12.04□□□□□ -0.48
LINC00343-207ENST00000599179 PDE4DQ08499 809 aa12.04□□□□□ -0.48
LINC00343-207ENST00000599179 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-207ENST00000599179 TSC1Q92574 1164 aa12.04□□□□□ -0.48
LINC00343-207ENST00000599179 KLF16Q9BXK1 252 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-207ENST00000599179 NBPF14Q5TI25 921 aa12.03□□□□□ -0.48
LINC00343-207ENST00000599179 PURBQ96QR8 312 aaKnown RBP12.03□□□□□ -0.48
LINC00343-207ENST00000599179 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
LINC00343-207ENST00000599179 ABCA8O94911 1581 aa12.02□□□□□ -0.49
LINC00343-207ENST00000599179 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms