RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 RLBP1P12271 317 aa25.14■■□□□ 1.62
CAPN12-207ENST00000597716 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
CAPN12-207ENST00000597716 BCL2L13Q9BXK5 485 aa25.14■■□□□ 1.62
CAPN12-207ENST00000597716 PHACTR3Q96KR7 559 aa25.14■■□□□ 1.61
CAPN12-207ENST00000597716 USP54Q70EL1 1684 aa25.14■■□□□ 1.61
CAPN12-207ENST00000597716 LMOD3Q0VAK6 560 aa25.13■■□□□ 1.61
CAPN12-207ENST00000597716 CHD2O14647 1828 aaKnown RBP25.13■■□□□ 1.61
CAPN12-207ENST00000597716 ALDH1L2Q3SY69 923 aa25.12■■□□□ 1.61
CAPN12-207ENST00000597716 SMC4Q9NTJ3 1288 aa25.12■■□□□ 1.61
CAPN12-207ENST00000597716 MVPQ14764 893 aaKnown RBP25.11■■□□□ 1.61
CAPN12-207ENST00000597716 PMFBP1Q8TBY8 1022 aa25.11■■□□□ 1.61
CAPN12-207ENST00000597716 IPO9Q96P70 1041 aaKnown RBP25.11■■□□□ 1.61
CAPN12-207ENST00000597716 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 IFT57Q9NWB7 429 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 KIF16BQ96L93 1317 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 IGHDP01880 384 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 SKAP1Q86WV1 359 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 DZIP1LQ8IYY4 767 aaKnown RBP25.1■■□□□ 1.61
CAPN12-207ENST00000597716 PIK3C2AO00443 1686 aa25.1■■□□□ 1.61
CAPN12-207ENST00000597716 NUTM2FA1L443 756 aa25.09■■□□□ 1.61
CAPN12-207ENST00000597716 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
CAPN12-207ENST00000597716 ERICH6Q7L0X2 663 aa25.08■■□□□ 1.61
CAPN12-207ENST00000597716 TNNQ9UQP3 1299 aa25.08■■□□□ 1.61
CAPN12-207ENST00000597716 GNAI1P63096 354 aa25.08■■□□□ 1.61
CAPN12-207ENST00000597716 SETD1BQ9UPS6 1966 aaKnown RBP25.08■■□□□ 1.6
CAPN12-207ENST00000597716 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CAPN12-207ENST00000597716 FTSJ3Q8IY81 847 aaKnown RBP25.07■■□□□ 1.6
CAPN12-207ENST00000597716 ZNF853P0CG23 659 aa25.07■■□□□ 1.6
CAPN12-207ENST00000597716 KCNA6P17658 529 aa25.07■■□□□ 1.6
CAPN12-207ENST00000597716 ATF7IPQ6VMQ6 1270 aa25.06■■□□□ 1.6
CAPN12-207ENST00000597716 VIRMAQ69YN4 1812 aaKnown RBP25.06■■□□□ 1.6
CAPN12-207ENST00000597716 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
CAPN12-207ENST00000597716 TRIM27P14373 513 aa25.05■■□□□ 1.6
CAPN12-207ENST00000597716 FAM161AQ3B820 660 aa25.04■■□□□ 1.6
CAPN12-207ENST00000597716 ANKLE2Q86XL3 938 aa25.04■■□□□ 1.6
CAPN12-207ENST00000597716 IPO8O15397 1037 aaKnown RBP25.04■■□□□ 1.6
CAPN12-207ENST00000597716 NGDNQ8NEJ9 315 aaKnown RBP25.04■■□□□ 1.6
CAPN12-207ENST00000597716 SBNO1A3KN83 1393 aa25.03■■□□□ 1.6
CAPN12-207ENST00000597716 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
CAPN12-207ENST00000597716 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
CAPN12-207ENST00000597716 PCDHB15Q9Y5E8 787 aa25.03■■□□□ 1.6
CAPN12-207ENST00000597716 FLT4P35916 1363 aa25.02■■□□□ 1.6
CAPN12-207ENST00000597716 DDX19BQ9UMR2 479 aa25.02■■□□□ 1.6
CAPN12-207ENST00000597716 CFAP44Q96MT7 982 aa25.01■■□□□ 1.59
CAPN12-207ENST00000597716 KIF24Q5T7B8 1368 aa25.01■■□□□ 1.59
CAPN12-207ENST00000597716 NOB1Q9ULX3 412 aaKnown RBP25.01■■□□□ 1.59
CAPN12-207ENST00000597716 C8orf34Q49A92 452 aa25■■□□□ 1.59
CAPN12-207ENST00000597716 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
CAPN12-207ENST00000597716 SULT6B1Q6IMI4 303 aa24.98■■□□□ 1.59
CAPN12-207ENST00000597716 MAP3K19Q56UN5 1328 aa24.98■■□□□ 1.59
CAPN12-207ENST00000597716 RGS3P49796 1198 aa24.98■■□□□ 1.59
CAPN12-207ENST00000597716 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
CAPN12-207ENST00000597716 MBIPQ9NS73 344 aa24.98■■□□□ 1.59
CAPN12-207ENST00000597716 VAMP4O75379 141 aa24.97■■□□□ 1.59
CAPN12-207ENST00000597716 HSP90AB2PQ58FF8 381 aa24.97■■□□□ 1.59
CAPN12-207ENST00000597716 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
CAPN12-207ENST00000597716 KDRP35968 1356 aa24.96■■□□□ 1.59
CAPN12-207ENST00000597716 AEBP1Q8IUX7 1158 aa24.96■■□□□ 1.59
CAPN12-207ENST00000597716 ARHGAP45Q92619 1136 aa24.96■■□□□ 1.59
CAPN12-207ENST00000597716 ZBTB47Q9UFB7 747 aaPredicted RBP24.94■■□□□ 1.58
CAPN12-207ENST00000597716 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
CAPN12-207ENST00000597716 HDAC1Q13547 482 aaPredicted RBP24.93■■□□□ 1.58
CAPN12-207ENST00000597716 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
CAPN12-207ENST00000597716 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
CAPN12-207ENST00000597716 MRPL50Q8N5N7 158 aaKnown RBP24.93■■□□□ 1.58
CAPN12-207ENST00000597716 TMEM57Q8N5G2 664 aa24.92■■□□□ 1.58
CAPN12-207ENST00000597716 NWD1Q149M9 1564 aa24.91■■□□□ 1.58
CAPN12-207ENST00000597716 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
CAPN12-207ENST00000597716 IGSF1Q8N6C5 1336 aa24.9■■□□□ 1.58
CAPN12-207ENST00000597716 FAM83GA6ND36 823 aa24.9■■□□□ 1.58
CAPN12-207ENST00000597716 TWISTNBQ3B726 338 aaPredicted RBP24.9■■□□□ 1.58
CAPN12-207ENST00000597716 DDRGK1Q96HY6 314 aa24.9■■□□□ 1.58
CAPN12-207ENST00000597716 ZBTB40Q9NUA8 1239 aa24.9■■□□□ 1.58
CAPN12-207ENST00000597716 PAK3O75914 559 aaPredicted RBP24.89■■□□□ 1.58
CAPN12-207ENST00000597716 TSPYL6Q8N831 410 aa24.89■■□□□ 1.58
CAPN12-207ENST00000597716 CHMP4BQ9H444 224 aaKnown RBP24.89■■□□□ 1.58
CAPN12-207ENST00000597716 HAP1P54257 671 aaPredicted RBP24.88■■□□□ 1.57
CAPN12-207ENST00000597716 NLRP6P59044 892 aa24.88■■□□□ 1.57
CAPN12-207ENST00000597716 RTL1A6NKG5 1358 aa24.88■■□□□ 1.57
CAPN12-207ENST00000597716 KIAA0232Q92628 1395 aa24.87■■□□□ 1.57
CAPN12-207ENST00000597716 AMPHP49418 695 aa24.87■■□□□ 1.57
CAPN12-207ENST00000597716 PDZRN3Q9UPQ7 1066 aa24.87■■□□□ 1.57
CAPN12-207ENST00000597716 PHF8Q9UPP1 1060 aa24.87■■□□□ 1.57
CAPN12-207ENST00000597716 CHL1O00533 1208 aa24.86■■□□□ 1.57
CAPN12-207ENST00000597716 SOX12O15370 315 aa24.86■■□□□ 1.57
CAPN12-207ENST00000597716 ABCC4O15439 1325 aa24.85■■□□□ 1.57
CAPN12-207ENST00000597716 CRB1P82279 1406 aa24.85■■□□□ 1.57
CAPN12-207ENST00000597716 DCTN1Q14203 1278 aa24.85■■□□□ 1.57
CAPN12-207ENST00000597716 C8orf58Q8NAV2 365 aa24.85■■□□□ 1.57
CAPN12-207ENST00000597716 LRRC37A3O60309 1634 aa24.84■■□□□ 1.57
CAPN12-207ENST00000597716 PHRF1Q9P1Y6 1649 aaKnown RBP24.83■■□□□ 1.57
CAPN12-207ENST00000597716 LTN1O94822 1766 aa24.83■■□□□ 1.56
CAPN12-207ENST00000597716 HOXC9P31274 260 aa24.82■■□□□ 1.56
CAPN12-207ENST00000597716 SMC5Q8IY18 1101 aa24.82■■□□□ 1.56
CAPN12-207ENST00000597716 ABTB2Q8N961 1025 aa24.82■■□□□ 1.56
CAPN12-207ENST00000597716 EYA1Q99502 592 aa24.82■■□□□ 1.56
CAPN12-207ENST00000597716 NFAT5O94916 1531 aa24.81■■□□□ 1.56
CAPN12-207ENST00000597716 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
CAPN12-207ENST00000597716 API5Q9BZZ5 524 aaKnown RBP24.81■■□□□ 1.56
CAPN12-207ENST00000597716 HTATSF1O43719 755 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms