RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
PNKP-204ENST00000594661 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
PNKP-204ENST00000594661 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
PNKP-204ENST00000594661 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
PNKP-204ENST00000594661 CRBNQ96SW2 442 aa19.72■□□□□ 0.75
PNKP-204ENST00000594661 TTC21AQ8NDW8 1320 aa19.71■□□□□ 0.75
PNKP-204ENST00000594661 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
PNKP-204ENST00000594661 IL13P35225 146 aa19.71■□□□□ 0.75
PNKP-204ENST00000594661 WDR63Q8IWG1 891 aa19.71■□□□□ 0.75
PNKP-204ENST00000594661 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
PNKP-204ENST00000594661 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
PNKP-204ENST00000594661 RRAGDQ9NQL2 400 aaPredicted RBP19.7■□□□□ 0.74
PNKP-204ENST00000594661 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
PNKP-204ENST00000594661 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
PNKP-204ENST00000594661 PIK3C2AO00443 1686 aa19.69■□□□□ 0.74
PNKP-204ENST00000594661 FCHSD2O94868 740 aa19.69■□□□□ 0.74
PNKP-204ENST00000594661 C20orf194Q5TEA3 1177 aa19.69■□□□□ 0.74
PNKP-204ENST00000594661 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
PNKP-204ENST00000594661 HMOX1P09601 288 aa19.67■□□□□ 0.74
PNKP-204ENST00000594661 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
PNKP-204ENST00000594661 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
PNKP-204ENST00000594661 TRIM35Q9UPQ4 493 aa19.67■□□□□ 0.74
PNKP-204ENST00000594661 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
PNKP-204ENST00000594661 SOX12O15370 315 aa19.66■□□□□ 0.74
PNKP-204ENST00000594661 RIPK4P57078 832 aa19.64■□□□□ 0.73
PNKP-204ENST00000594661 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.73
PNKP-204ENST00000594661 MARF1Q9Y4F3 1742 aaKnown RBP19.63■□□□□ 0.73
PNKP-204ENST00000594661 BCAR3O75815 825 aa19.63■□□□□ 0.73
PNKP-204ENST00000594661 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
PNKP-204ENST00000594661 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
PNKP-204ENST00000594661 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
PNKP-204ENST00000594661 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
PNKP-204ENST00000594661 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
PNKP-204ENST00000594661 MAP3K19Q56UN5 1328 aa19.61■□□□□ 0.73
PNKP-204ENST00000594661 HSP90AB2PQ58FF8 381 aa19.6■□□□□ 0.73
PNKP-204ENST00000594661 USP54Q70EL1 1684 aa19.6■□□□□ 0.73
PNKP-204ENST00000594661 NLRP6P59044 892 aa19.6■□□□□ 0.73
PNKP-204ENST00000594661 NUTM2GQ5VZR2 741 aa19.6■□□□□ 0.73
PNKP-204ENST00000594661 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
PNKP-204ENST00000594661 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.73
PNKP-204ENST00000594661 TSR2Q969E8 191 aaKnown RBP19.58■□□□□ 0.73
PNKP-204ENST00000594661 FRAT2O75474 233 aaPredicted RBP19.58■□□□□ 0.72
PNKP-204ENST00000594661 HSPA2P54652 639 aa19.58■□□□□ 0.72
PNKP-204ENST00000594661 NFE2L2Q16236 605 aa19.58■□□□□ 0.72
PNKP-204ENST00000594661 RGPD1P0DJD0 1748 aa19.58■□□□□ 0.72
PNKP-204ENST00000594661 ABTB2Q8N961 1025 aa19.57■□□□□ 0.72
PNKP-204ENST00000594661 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
PNKP-204ENST00000594661 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
PNKP-204ENST00000594661 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
PNKP-204ENST00000594661 IL16Q14005 1332 aa19.56■□□□□ 0.72
PNKP-204ENST00000594661 FLT4P35916 1363 aa19.56■□□□□ 0.72
PNKP-204ENST00000594661 CLCN1P35523 988 aa19.55■□□□□ 0.72
PNKP-204ENST00000594661 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
PNKP-204ENST00000594661 NAP1L5Q96NT1 182 aaPredicted RBP19.55■□□□□ 0.72
PNKP-204ENST00000594661 KDM4FA0A1W2PPD8 638 aa19.55■□□□□ 0.72
PNKP-204ENST00000594661 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
PNKP-204ENST00000594661 L1TD1Q5T7N2 865 aaKnown RBP19.54■□□□□ 0.72
PNKP-204ENST00000594661 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
PNKP-204ENST00000594661 DLG5Q8TDM6 1919 aa19.54■□□□□ 0.72
PNKP-204ENST00000594661 AMPHP49418 695 aa19.52■□□□□ 0.72
PNKP-204ENST00000594661 PSME1Q06323 249 aa19.52■□□□□ 0.72
PNKP-204ENST00000594661 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
PNKP-204ENST00000594661 THUMPD2Q9BTF0 503 aaKnown RBP19.52■□□□□ 0.72
PNKP-204ENST00000594661 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
PNKP-204ENST00000594661 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
PNKP-204ENST00000594661 BCL2L13Q9BXK5 485 aa19.51■□□□□ 0.71
PNKP-204ENST00000594661 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
PNKP-204ENST00000594661 TMEM94Q12767 1356 aa19.5■□□□□ 0.71
PNKP-204ENST00000594661 C19orf44Q9H6X5 657 aa19.5■□□□□ 0.71
PNKP-204ENST00000594661 KDM2BQ8NHM5 1336 aa19.5■□□□□ 0.71
PNKP-204ENST00000594661 C1orf167Q5SNV9 1468 aa19.5■□□□□ 0.71
PNKP-204ENST00000594661 LMTK3Q96Q04 1460 aa19.49■□□□□ 0.71
PNKP-204ENST00000594661 FOXO3O43524 673 aa19.49■□□□□ 0.71
PNKP-204ENST00000594661 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
PNKP-204ENST00000594661 HOXC9P31274 260 aa19.48■□□□□ 0.71
PNKP-204ENST00000594661 CENPQQ7L2Z9 268 aaPredicted RBP19.48■□□□□ 0.71
PNKP-204ENST00000594661 CT47B1P0C2W7 299 aaPredicted RBP19.48■□□□□ 0.71
PNKP-204ENST00000594661 PDE3AQ14432 1141 aa19.48■□□□□ 0.71
PNKP-204ENST00000594661 NFAT5O94916 1531 aa19.47■□□□□ 0.71
PNKP-204ENST00000594661 KIF24Q5T7B8 1368 aa19.47■□□□□ 0.71
PNKP-204ENST00000594661 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
PNKP-204ENST00000594661 LTN1O94822 1766 aa19.47■□□□□ 0.71
PNKP-204ENST00000594661 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
PNKP-204ENST00000594661 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
PNKP-204ENST00000594661 EYA1Q99502 592 aa19.46■□□□□ 0.71
PNKP-204ENST00000594661 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
PNKP-204ENST00000594661 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
PNKP-204ENST00000594661 RBM10P98175 930 aaKnown RBP19.45■□□□□ 0.7
PNKP-204ENST00000594661 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
PNKP-204ENST00000594661 KDRP35968 1356 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 MST1RQ04912 1400 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 STRCQ7RTU9 1775 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 AAMPQ13685 434 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
PNKP-204ENST00000594661 CALD1Q05682 793 aaKnown RBP19.44■□□□□ 0.7
PNKP-204ENST00000594661 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
PNKP-204ENST00000594661 IFT57Q9NWB7 429 aa19.43■□□□□ 0.7
PNKP-204ENST00000594661 RTL1A6NKG5 1358 aa19.43■□□□□ 0.7
PNKP-204ENST00000594661 ZNF853P0CG23 659 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms