RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	TRIM35	Q9UPQ4	493 aa		13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	KIF13A	Q9H1H9	1805 aa		13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	PPL	O60437	1756 aa		13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	RWDD1	Q9H446	243 aa	Predicted RBP	13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	C1orf115	Q9H7X2	142 aa		13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	CCDC9	Q9Y3X0	531 aa	Known RBP	13.75	□□□□□ -0.21
ILF3-222	ENST00000592763	CADPS2	Q86UW7	1296 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	GAS2L2	Q8NHY3	880 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	KCNH5	Q8NCM2	988 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	FAM135B	Q49AJ0	1406 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	GC	P02774	474 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	PRDM11	Q9NQV5	511 aa		13.74	□□□□□ -0.21
ILF3-222	ENST00000592763	TSPYL6	Q8N831	410 aa		13.73	□□□□□ -0.21
ILF3-222	ENST00000592763	MBIP	Q9NS73	344 aa		13.73	□□□□□ -0.21
ILF3-222	ENST00000592763	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.73	□□□□□ -0.21
ILF3-222	ENST00000592763	PTPRU	Q92729	1446 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	PIP4K2B	P78356	416 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	MTHFSD	Q2M296	383 aa	Known RBP	13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	NPHP4	O75161	1426 aa	Predicted RBP	13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	MYO5B	Q9ULV0	1848 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	SLC4A2	P04920	1241 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	ATF7IP	Q6VMQ6	1270 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	MPRIP	Q6WCQ1	1025 aa		13.72	□□□□□ -0.21
ILF3-222	ENST00000592763	HOXC9	P31274	260 aa		13.71	□□□□□ -0.21
ILF3-222	ENST00000592763	FKBP5	Q13451	457 aa	Predicted RBP	13.71	□□□□□ -0.21
ILF3-222	ENST00000592763	PDE3A	Q14432	1141 aa		13.71	□□□□□ -0.21
ILF3-222	ENST00000592763	KIF16B	Q96L93	1317 aa		13.71	□□□□□ -0.22
ILF3-222	ENST00000592763	PLEKHF1	Q96S99	279 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	UPF2	Q9HAU5	1272 aa	Known RBP	13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	RLBP1	P12271	317 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	C8orf58	Q8NAV2	365 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	DDX19B	Q9UMR2	479 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	TOM1L2	Q6ZVM7	507 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	TMEM57	Q8N5G2	664 aa		13.7	□□□□□ -0.22
ILF3-222	ENST00000592763	GNAT3	A8MTJ3	354 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	TRIM27	P14373	513 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	TMEM94	Q12767	1356 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	CCDC27	Q2M243	656 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	ANKRD24	Q8TF21	1146 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	ZNF521	Q96K83	1311 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	KIAA1210	Q9ULL0	1709 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	FLT4	P35916	1363 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	USP6	P35125	1406 aa		13.69	□□□□□ -0.22
ILF3-222	ENST00000592763	POLR1A	O95602	1720 aa	Predicted RBP	13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	PDE4A	P27815	886 aa		13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	CFAP44	Q96MT7	982 aa		13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	MSH6	P52701	1360 aa		13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	DDX54	Q8TDD1	881 aa	Known RBP	13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	IFT57	Q9NWB7	429 aa		13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	NEURL4	Q96JN8	1562 aa		13.68	□□□□□ -0.22
ILF3-222	ENST00000592763	ATP7B	P35670	1465 aa		13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	NUTM2E	B1AL46	878 aa	Predicted RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	SYTL4	Q96C24	671 aa	Predicted RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	AIMP1	Q12904	312 aa	Known RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	NBR1	Q14596	966 aa		13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	MVP	Q14764	893 aa	Known RBP	13.67	□□□□□ -0.22
ILF3-222	ENST00000592763	ANKRD45	Q5TZF3	282 aa		13.66	□□□□□ -0.22
ILF3-222	ENST00000592763	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.66	□□□□□ -0.22
ILF3-222	ENST00000592763	RERE	Q9P2R6	1566 aa		13.66	□□□□□ -0.22
ILF3-222	ENST00000592763	CHMP4B	Q9H444	224 aa	Known RBP	13.66	□□□□□ -0.22
ILF3-222	ENST00000592763	NBPF6	Q5VWK0	638 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	NBPF4	Q96M43	638 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	API5	Q9BZZ5	524 aa	Known RBP	13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	LNPK	Q9C0E8	428 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763		F6X3S4	739 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	HDGFL1	Q5TGJ6	251 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	NPHP3	Q7Z494	1330 aa		13.65	□□□□□ -0.22
ILF3-222	ENST00000592763	IGHD	P01880	384 aa		13.65	□□□□□ -0.23
ILF3-222	ENST00000592763	TAT	P17735	454 aa	Predicted RBP	13.65	□□□□□ -0.23
ILF3-222	ENST00000592763	RNF123	Q5XPI4	1314 aa		13.64	□□□□□ -0.23
ILF3-222	ENST00000592763	OS9	Q13438	667 aa	Predicted RBP	13.64	□□□□□ -0.23
ILF3-222	ENST00000592763	RIMS1	Q86UR5	1692 aa	Known RBP	13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	BTBD11	A6QL63	1104 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	ADAMTS2	O95450	1211 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	ANXA1	P04083	346 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	TTC5	Q8N0Z6	440 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	IP6K1	Q92551	441 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	CPSF1	Q10570	1443 aa	Known RBP	13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	VAMP4	O75379	141 aa		13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	CT47B1	P0C2W7	299 aa	Predicted RBP	13.63	□□□□□ -0.23
ILF3-222	ENST00000592763	CPS1	P31327	1500 aa		13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	SBNO1	A3KN83	1393 aa		13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	SLAIN2	Q9P270	581 aa		13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	PCDHB15	Q9Y5E8	787 aa		13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	TRMT2A	Q8IZ69	625 aa	Known RBP	13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	CD163L1	Q9NR16	1453 aa		13.62	□□□□□ -0.23
ILF3-222	ENST00000592763	TAF7	Q15545	349 aa	Predicted RBP	13.61	□□□□□ -0.23
ILF3-222	ENST00000592763	PDZRN3	Q9UPQ7	1066 aa		13.61	□□□□□ -0.23
ILF3-222	ENST00000592763	CCDC30	Q5VVM6	783 aa		13.61	□□□□□ -0.23
ILF3-222	ENST00000592763	IL16	Q14005	1332 aa		13.61	□□□□□ -0.23
ILF3-222	ENST00000592763	LGR6	Q9HBX8	967 aa		13.6	□□□□□ -0.23
ILF3-222	ENST00000592763	PIK3R4	Q99570	1358 aa		13.6	□□□□□ -0.23
ILF3-222	ENST00000592763	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.6	□□□□□ -0.23
ILF3-222	ENST00000592763	AATK	Q6ZMQ8	1374 aa		13.6	□□□□□ -0.23
ILF3-222	ENST00000592763	FER1L4	A9Z1Z3	1794 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms