RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
DNMT1-224ENST00000591764 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
DNMT1-224ENST00000591764 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
DNMT1-224ENST00000591764 USP21Q9UK80 565 aa12.37□□□□□ -0.43
DNMT1-224ENST00000591764 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-224ENST00000591764 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
DNMT1-224ENST00000591764 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
DNMT1-224ENST00000591764 LRPPRCP42704 1394 aaKnown RBP12.35□□□□□ -0.43
DNMT1-224ENST00000591764 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
DNMT1-224ENST00000591764 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-224ENST00000591764 CRISPLD2Q9H0B8 497 aa12.35□□□□□ -0.43
DNMT1-224ENST00000591764 SRCAPQ6ZRS2 3230 aa12.34□□□□□ -0.43
DNMT1-224ENST00000591764 COL22A1Q8NFW1 1626 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-224ENST00000591764 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
DNMT1-224ENST00000591764 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
DNMT1-224ENST00000591764 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
DNMT1-224ENST00000591764 ATRNO75882 1429 aa12.32□□□□□ -0.44
DNMT1-224ENST00000591764 PBX2P40425 430 aa12.32□□□□□ -0.44
DNMT1-224ENST00000591764 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
DNMT1-224ENST00000591764 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-224ENST00000591764 PPLO60437 1756 aa12.32□□□□□ -0.44
DNMT1-224ENST00000591764 NAIPQ13075 1403 aa12.31□□□□□ -0.44
DNMT1-224ENST00000591764 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
DNMT1-224ENST00000591764 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
DNMT1-224ENST00000591764 MYOM2P54296 1465 aa12.3□□□□□ -0.44
DNMT1-224ENST00000591764 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
DNMT1-224ENST00000591764 EP400Q96L91 3159 aa12.3□□□□□ -0.44
DNMT1-224ENST00000591764 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
DNMT1-224ENST00000591764 PPARGC1BQ86YN6 1023 aaKnown RBP12.28□□□□□ -0.44
DNMT1-224ENST00000591764 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
DNMT1-224ENST00000591764 PXDNQ92626 1479 aa12.27□□□□□ -0.44
DNMT1-224ENST00000591764 KIF1AQ12756 1690 aa12.27□□□□□ -0.45
DNMT1-224ENST00000591764 PTGER2P43116 358 aa12.27□□□□□ -0.45
DNMT1-224ENST00000591764 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
DNMT1-224ENST00000591764 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
DNMT1-224ENST00000591764 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.45
DNMT1-224ENST00000591764 FOXO3O43524 673 aa12.26□□□□□ -0.45
DNMT1-224ENST00000591764 TECPR2O15040 1411 aa12.26□□□□□ -0.45
DNMT1-224ENST00000591764 TBC1D12O60347 775 aa12.25□□□□□ -0.45
DNMT1-224ENST00000591764 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-224ENST00000591764 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
DNMT1-224ENST00000591764 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-224ENST00000591764 BCL9LQ86UU0 1499 aa12.25□□□□□ -0.45
DNMT1-224ENST00000591764 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
DNMT1-224ENST00000591764 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-224ENST00000591764 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
DNMT1-224ENST00000591764 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
DNMT1-224ENST00000591764 BLMP54132 1417 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-224ENST00000591764 PSEN2P49810 448 aa12.23□□□□□ -0.45
DNMT1-224ENST00000591764 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-224ENST00000591764 STK26Q9P289 416 aa12.23□□□□□ -0.45
DNMT1-224ENST00000591764 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
DNMT1-224ENST00000591764 PDE4AP27815 886 aa12.22□□□□□ -0.45
DNMT1-224ENST00000591764 PSME1Q06323 249 aa12.22□□□□□ -0.45
DNMT1-224ENST00000591764 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
DNMT1-224ENST00000591764 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
DNMT1-224ENST00000591764 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
DNMT1-224ENST00000591764 ADGRF5Q8IZF2 1346 aa12.21□□□□□ -0.45
DNMT1-224ENST00000591764 FMN2Q9NZ56 1722 aa12.21□□□□□ -0.45
DNMT1-224ENST00000591764 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
DNMT1-224ENST00000591764 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
DNMT1-224ENST00000591764 SLIT2O94813 1529 aa12.21□□□□□ -0.46
DNMT1-224ENST00000591764 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 SPATA31A3Q5VYP0 1347 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
DNMT1-224ENST00000591764 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
DNMT1-224ENST00000591764 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
DNMT1-224ENST00000591764 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
DNMT1-224ENST00000591764 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
DNMT1-224ENST00000591764 ADGRD1Q6QNK2 874 aa12.19□□□□□ -0.46
DNMT1-224ENST00000591764 SPATA31E1Q6ZUB1 1445 aa12.19□□□□□ -0.46
DNMT1-224ENST00000591764 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
DNMT1-224ENST00000591764 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
DNMT1-224ENST00000591764 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
DNMT1-224ENST00000591764 GLI3P10071 1580 aa12.18□□□□□ -0.46
DNMT1-224ENST00000591764 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
DNMT1-224ENST00000591764 DHX57Q6P158 1386 aaKnown RBP12.17□□□□□ -0.46
DNMT1-224ENST00000591764 VPS72Q15906 364 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 SBNO1A3KN83 1393 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 PLEKHH1Q9ULM0 1364 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
DNMT1-224ENST00000591764 A0A0G2JS52 829 aa12.15□□□□□ -0.46
DNMT1-224ENST00000591764 MYT1Q01538 1121 aa12.15□□□□□ -0.46
DNMT1-224ENST00000591764 MFSD10Q14728 455 aa12.15□□□□□ -0.46
DNMT1-224ENST00000591764 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
DNMT1-224ENST00000591764 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
DNMT1-224ENST00000591764 BRWD3Q6RI45 1802 aa12.15□□□□□ -0.46
DNMT1-224ENST00000591764 EIF3AQ14152 1382 aaKnown RBP12.15□□□□□ -0.46
DNMT1-224ENST00000591764 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
DNMT1-224ENST00000591764 BAG6P46379 1132 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms