RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 ANKARQ7Z5J8 1434 aa14.64□□□□□ -0.07
TPM4-213ENST00000591226 PHACTR3Q96KR7 559 aa14.64□□□□□ -0.07
TPM4-213ENST00000591226 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
TPM4-213ENST00000591226 TMEM132AQ24JP5 1023 aa14.63□□□□□ -0.07
TPM4-213ENST00000591226 NEFMP07197 916 aa14.63□□□□□ -0.07
TPM4-213ENST00000591226 IL16Q14005 1332 aa14.63□□□□□ -0.07
TPM4-213ENST00000591226 TTC21AQ8NDW8 1320 aa14.63□□□□□ -0.07
TPM4-213ENST00000591226 USP31Q70CQ4 1352 aa14.62□□□□□ -0.07
TPM4-213ENST00000591226 PEAK1Q9H792 1746 aa14.62□□□□□ -0.07
TPM4-213ENST00000591226 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
TPM4-213ENST00000591226 SOX12O15370 315 aa14.62□□□□□ -0.07
TPM4-213ENST00000591226 FRAT1Q92837 279 aaPredicted RBP14.62□□□□□ -0.07
TPM4-213ENST00000591226 PDE3AQ14432 1141 aa14.61□□□□□ -0.07
TPM4-213ENST00000591226 NFE2L2Q16236 605 aa14.61□□□□□ -0.07
TPM4-213ENST00000591226 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
TPM4-213ENST00000591226 PANK1Q8TE04 598 aa14.61□□□□□ -0.07
TPM4-213ENST00000591226 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
TPM4-213ENST00000591226 PIK3C2AO00443 1686 aa14.61□□□□□ -0.07
TPM4-213ENST00000591226 NPHP4O75161 1426 aaPredicted RBP14.6□□□□□ -0.07
TPM4-213ENST00000591226 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
TPM4-213ENST00000591226 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
TPM4-213ENST00000591226 TNNQ9UQP3 1299 aa14.59□□□□□ -0.07
TPM4-213ENST00000591226 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
TPM4-213ENST00000591226 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
TPM4-213ENST00000591226 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.08
TPM4-213ENST00000591226 SKAP1Q86WV1 359 aa14.58□□□□□ -0.08
TPM4-213ENST00000591226 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
TPM4-213ENST00000591226 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
TPM4-213ENST00000591226 DLG5Q8TDM6 1919 aa14.57□□□□□ -0.08
TPM4-213ENST00000591226 MAP3K19Q56UN5 1328 aa14.57□□□□□ -0.08
TPM4-213ENST00000591226 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
TPM4-213ENST00000591226 C14orf37Q86TY3 774 aa14.57□□□□□ -0.08
TPM4-213ENST00000591226 RLBP1P12271 317 aa14.56□□□□□ -0.08
TPM4-213ENST00000591226 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
TPM4-213ENST00000591226 RGPD1P0DJD0 1748 aa14.56□□□□□ -0.08
TPM4-213ENST00000591226 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
TPM4-213ENST00000591226 SULT6B1Q6IMI4 303 aa14.56□□□□□ -0.08
TPM4-213ENST00000591226 MARF1Q9Y4F3 1742 aaKnown RBP14.55□□□□□ -0.08
TPM4-213ENST00000591226 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
TPM4-213ENST00000591226 NLRP6P59044 892 aa14.55□□□□□ -0.08
TPM4-213ENST00000591226 SMC4Q9NTJ3 1288 aa14.55□□□□□ -0.08
TPM4-213ENST00000591226 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 PHF8Q9UPP1 1060 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 SBNO1A3KN83 1393 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 MSH5O43196 834 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 FLT4P35916 1363 aa14.54□□□□□ -0.08
TPM4-213ENST00000591226 UBE2Q2Q8WVN8 375 aa14.53□□□□□ -0.08
TPM4-213ENST00000591226 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
TPM4-213ENST00000591226 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
TPM4-213ENST00000591226 USP54Q70EL1 1684 aa14.53□□□□□ -0.08
TPM4-213ENST00000591226 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.08
TPM4-213ENST00000591226 ZKSCAN2Q63HK3 967 aa14.52□□□□□ -0.08
TPM4-213ENST00000591226 FAM83GA6ND36 823 aa14.52□□□□□ -0.09
TPM4-213ENST00000591226 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
TPM4-213ENST00000591226 NWD1Q149M9 1564 aa14.52□□□□□ -0.09
TPM4-213ENST00000591226 AMPHP49418 695 aa14.51□□□□□ -0.09
TPM4-213ENST00000591226 IFT57Q9NWB7 429 aa14.51□□□□□ -0.09
TPM4-213ENST00000591226 ARHGEF10O15013 1369 aa14.51□□□□□ -0.09
TPM4-213ENST00000591226 ZNF853P0CG23 659 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 MS4A1P11836 297 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 GNAI1P63096 354 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 MBIPQ9NS73 344 aa14.5□□□□□ -0.09
TPM4-213ENST00000591226 IGHDP01880 384 aa14.49□□□□□ -0.09
TPM4-213ENST00000591226 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
TPM4-213ENST00000591226 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
TPM4-213ENST00000591226 TRIM27P14373 513 aa14.49□□□□□ -0.09
TPM4-213ENST00000591226 MVPQ14764 893 aaKnown RBP14.49□□□□□ -0.09
TPM4-213ENST00000591226 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
TPM4-213ENST00000591226 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
TPM4-213ENST00000591226 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
TPM4-213ENST00000591226 TSPYL6Q8N831 410 aa14.48□□□□□ -0.09
TPM4-213ENST00000591226 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
TPM4-213ENST00000591226 PDE4AP27815 886 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 HOXC9P31274 260 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 AAMPQ13685 434 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 ATF7IPQ6VMQ6 1270 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 EYA1Q99502 592 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 KIF16BQ96L93 1317 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 PCDHB15Q9Y5E8 787 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
TPM4-213ENST00000591226 KDRP35968 1356 aa14.46□□□□□ -0.09
TPM4-213ENST00000591226 VAMP4O75379 141 aa14.46□□□□□ -0.09
TPM4-213ENST00000591226 PSME1Q06323 249 aa14.46□□□□□ -0.09
TPM4-213ENST00000591226 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.1
TPM4-213ENST00000591226 PROSER2Q86WR7 435 aaPredicted RBP14.46□□□□□ -0.1
TPM4-213ENST00000591226 MCM10Q7L590 875 aa14.45□□□□□ -0.1
TPM4-213ENST00000591226 ZNF428Q96B54 188 aa14.45□□□□□ -0.1
TPM4-213ENST00000591226 ORAI2Q96SN7 254 aa14.45□□□□□ -0.1
TPM4-213ENST00000591226 BACH2Q9BYV9 841 aa14.45□□□□□ -0.1
TPM4-213ENST00000591226 ELL2O00472 640 aaPredicted RBP14.45□□□□□ -0.1
TPM4-213ENST00000591226 LTN1O94822 1766 aa14.44□□□□□ -0.1
TPM4-213ENST00000591226 NFAT5O94916 1531 aa14.44□□□□□ -0.1
TPM4-213ENST00000591226 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
TPM4-213ENST00000591226 C8orf58Q8NAV2 365 aa14.44□□□□□ -0.1
TPM4-213ENST00000591226 IPO8O15397 1037 aaKnown RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 FOXO3O43524 673 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms