RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 MAP3K19Q56UN5 1328 aa23.92■■□□□ 1.42
CTDP1-205ENST00000590599 APAF1O14727 1248 aa23.92■■□□□ 1.42
CTDP1-205ENST00000590599 SBNO1A3KN83 1393 aa23.92■■□□□ 1.42
CTDP1-205ENST00000590599 ALS2Q96Q42 1657 aa23.92■■□□□ 1.42
CTDP1-205ENST00000590599 LMOD2Q6P5Q4 547 aa23.91■■□□□ 1.42
CTDP1-205ENST00000590599 C8orf37Q96NL8 207 aa23.91■■□□□ 1.42
CTDP1-205ENST00000590599 FLT4P35916 1363 aa23.91■■□□□ 1.42
CTDP1-205ENST00000590599 IL13P35225 146 aa23.9■■□□□ 1.42
CTDP1-205ENST00000590599 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
CTDP1-205ENST00000590599 NGEFQ8N5V2 710 aa23.89■■□□□ 1.42
CTDP1-205ENST00000590599 NFAT5O94916 1531 aa23.89■■□□□ 1.41
CTDP1-205ENST00000590599 KIF24Q5T7B8 1368 aa23.89■■□□□ 1.41
CTDP1-205ENST00000590599 LTN1O94822 1766 aa23.88■■□□□ 1.41
CTDP1-205ENST00000590599 AMPHP49418 695 aa23.88■■□□□ 1.41
CTDP1-205ENST00000590599 KCNH5Q8NCM2 988 aa23.88■■□□□ 1.41
CTDP1-205ENST00000590599 PNNQ9H307 717 aaKnown RBP23.88■■□□□ 1.41
CTDP1-205ENST00000590599 SLIT3O75094 1523 aa23.88■■□□□ 1.41
CTDP1-205ENST00000590599 AFF2P51816 1311 aa23.87■■□□□ 1.41
CTDP1-205ENST00000590599 SPATA31A3Q5VYP0 1347 aa23.87■■□□□ 1.41
CTDP1-205ENST00000590599 MAPK8IP3Q9UPT6 1336 aa23.86■■□□□ 1.41
CTDP1-205ENST00000590599 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
CTDP1-205ENST00000590599 HSP90AB2PQ58FF8 381 aa23.86■■□□□ 1.41
CTDP1-205ENST00000590599 TCP11L2Q8N4U5 519 aa23.86■■□□□ 1.41
CTDP1-205ENST00000590599 CABLES1Q8TDN4 633 aa23.86■■□□□ 1.41
CTDP1-205ENST00000590599 FCHSD2O94868 740 aa23.85■■□□□ 1.41
CTDP1-205ENST00000590599 EIF4A2Q14240 407 aaKnown RBP23.85■■□□□ 1.41
CTDP1-205ENST00000590599 USP19O94966 1318 aa23.85■■□□□ 1.41
CTDP1-205ENST00000590599 RTL1A6NKG5 1358 aa23.85■■□□□ 1.41
CTDP1-205ENST00000590599 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
CTDP1-205ENST00000590599 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.41
CTDP1-205ENST00000590599 ZNF521Q96K83 1311 aa23.83■■□□□ 1.4
CTDP1-205ENST00000590599 ABCA3Q99758 1704 aa23.82■■□□□ 1.4
CTDP1-205ENST00000590599 RSPH6AQ9H0K4 717 aa23.82■■□□□ 1.4
CTDP1-205ENST00000590599 NEFMP07197 916 aa23.81■■□□□ 1.4
CTDP1-205ENST00000590599 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
CTDP1-205ENST00000590599 HOXC9P31274 260 aa23.81■■□□□ 1.4
CTDP1-205ENST00000590599 NGLY1Q96IV0 654 aa23.81■■□□□ 1.4
CTDP1-205ENST00000590599 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
CTDP1-205ENST00000590599 ARHGEF10O15013 1369 aa23.81■■□□□ 1.4
CTDP1-205ENST00000590599 GCP02774 474 aa23.8■■□□□ 1.4
CTDP1-205ENST00000590599 HMOX1P09601 288 aa23.8■■□□□ 1.4
CTDP1-205ENST00000590599 PRKAR2BP31323 418 aa23.8■■□□□ 1.4
CTDP1-205ENST00000590599 RRP7AQ9Y3A4 280 aaKnown RBP23.8■■□□□ 1.4
CTDP1-205ENST00000590599 NEUROD2Q15784 382 aa23.79■■□□□ 1.4
CTDP1-205ENST00000590599 GOLGA2Q08379 1002 aa23.78■■□□□ 1.4
CTDP1-205ENST00000590599 ZNF772Q68DY9 489 aaPredicted RBP23.78■■□□□ 1.4
CTDP1-205ENST00000590599 CDCA7LQ96GN5 454 aa23.78■■□□□ 1.4
CTDP1-205ENST00000590599 NCBP3Q53F19 620 aaKnown RBP23.78■■□□□ 1.4
CTDP1-205ENST00000590599 ZBTB7CA1YPR0 619 aa23.77■■□□□ 1.4
CTDP1-205ENST00000590599 IP6K1Q92551 441 aa23.76■■□□□ 1.39
CTDP1-205ENST00000590599 CCDC27Q2M243 656 aa23.75■■□□□ 1.39
CTDP1-205ENST00000590599 WWC1Q8IX03 1113 aa23.75■■□□□ 1.39
CTDP1-205ENST00000590599 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
CTDP1-205ENST00000590599 TMPOP42166 694 aaKnown RBP23.74■■□□□ 1.39
CTDP1-205ENST00000590599 SULT6B1Q6IMI4 303 aa23.74■■□□□ 1.39
CTDP1-205ENST00000590599 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
CTDP1-205ENST00000590599 QTRT2Q9H974 415 aaKnown RBP23.74■■□□□ 1.39
CTDP1-205ENST00000590599 USP21Q9UK80 565 aa23.73■■□□□ 1.39
CTDP1-205ENST00000590599 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
CTDP1-205ENST00000590599 SUPT16HQ9Y5B9 1047 aaKnown RBP23.72■■□□□ 1.39
CTDP1-205ENST00000590599 IGSF1Q8N6C5 1336 aa23.71■■□□□ 1.39
CTDP1-205ENST00000590599 LTV1Q96GA3 475 aaPredicted RBP23.7■■□□□ 1.39
CTDP1-205ENST00000590599 BCL9LQ86UU0 1499 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 E9PSI1 815 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 NEFLP07196 543 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 RXRBP28702 533 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 HAP1P54257 671 aaPredicted RBP23.7■■□□□ 1.38
CTDP1-205ENST00000590599 SLFN5Q08AF3 891 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 FNBP4Q8N3X1 1017 aaPredicted RBP23.7■■□□□ 1.38
CTDP1-205ENST00000590599 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
CTDP1-205ENST00000590599 RIPK4P57078 832 aa23.69■■□□□ 1.38
CTDP1-205ENST00000590599 WDR63Q8IWG1 891 aa23.69■■□□□ 1.38
CTDP1-205ENST00000590599 EYA1Q99502 592 aa23.69■■□□□ 1.38
CTDP1-205ENST00000590599 PLCH1Q4KWH8 1693 aa23.69■■□□□ 1.38
CTDP1-205ENST00000590599 KDRP35968 1356 aa23.69■■□□□ 1.38
CTDP1-205ENST00000590599 NFE2L2Q16236 605 aa23.68■■□□□ 1.38
CTDP1-205ENST00000590599 ZC3H6P61129 1189 aaKnown RBP23.68■■□□□ 1.38
CTDP1-205ENST00000590599 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
CTDP1-205ENST00000590599 EP400Q96L91 3159 aa23.66■■□□□ 1.38
CTDP1-205ENST00000590599 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
CTDP1-205ENST00000590599 SPINK5Q9NQ38 1064 aaPredicted RBP23.65■■□□□ 1.38
CTDP1-205ENST00000590599 ABCC6O95255 1503 aa23.64■■□□□ 1.38
CTDP1-205ENST00000590599 DLG5Q8TDM6 1919 aa23.64■■□□□ 1.38
CTDP1-205ENST00000590599 TRMT2AQ8IZ69 625 aaKnown RBP23.64■■□□□ 1.37
CTDP1-205ENST00000590599 RGS12O14924 1447 aa23.64■■□□□ 1.37
CTDP1-205ENST00000590599 RGPD5Q99666 1765 aa23.64■■□□□ 1.37
CTDP1-205ENST00000590599 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
CTDP1-205ENST00000590599 ATRNO75882 1429 aa23.63■■□□□ 1.37
CTDP1-205ENST00000590599 SLIT2O94813 1529 aa23.63■■□□□ 1.37
CTDP1-205ENST00000590599 CPDO75976 1380 aa23.63■■□□□ 1.37
CTDP1-205ENST00000590599 RCAN3Q9UKA8 241 aa23.63■■□□□ 1.37
CTDP1-205ENST00000590599 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
CTDP1-205ENST00000590599 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
CTDP1-205ENST00000590599 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
CTDP1-205ENST00000590599 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
CTDP1-205ENST00000590599 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
CTDP1-205ENST00000590599 COL18A1P39060 1754 aa23.61■■□□□ 1.37
CTDP1-205ENST00000590599 KIAA0232Q92628 1395 aa23.61■■□□□ 1.37
CTDP1-205ENST00000590599 TRPC5Q9UL62 973 aaPredicted RBP23.6■■□□□ 1.37
CTDP1-205ENST00000590599 MYH16Q9H6N6 1097 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms