RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 RIMBP3Q9UFD9 1639 aa15.53■□□□□ 0.08
PDE4A-207ENST00000590407 ABCC4O15439 1325 aa15.53■□□□□ 0.08
PDE4A-207ENST00000590407 VAMP4O75379 141 aa15.53■□□□□ 0.08
PDE4A-207ENST00000590407 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.08
PDE4A-207ENST00000590407 SPATA31D1Q6ZQQ2 1576 aa15.52■□□□□ 0.08
PDE4A-207ENST00000590407 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
PDE4A-207ENST00000590407 GOLGA6L3A6NEY3 463 aa15.51■□□□□ 0.07
PDE4A-207ENST00000590407 PTMSP20962 102 aa15.51■□□□□ 0.07
PDE4A-207ENST00000590407 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
PDE4A-207ENST00000590407 IL13P35225 146 aa15.5■□□□□ 0.07
PDE4A-207ENST00000590407 CFAP44Q96MT7 982 aa15.5■□□□□ 0.07
PDE4A-207ENST00000590407 TRAK2O60296 914 aa15.49■□□□□ 0.07
PDE4A-207ENST00000590407 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
PDE4A-207ENST00000590407 SIRT1Q96EB6 747 aa15.49■□□□□ 0.07
PDE4A-207ENST00000590407 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
PDE4A-207ENST00000590407 API5Q9BZZ5 524 aaKnown RBP15.48■□□□□ 0.07
PDE4A-207ENST00000590407 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
PDE4A-207ENST00000590407 RIMS2Q9UQ26 1411 aa15.48■□□□□ 0.07
PDE4A-207ENST00000590407 XRCC6P12956 609 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDE4A-207ENST00000590407 MRE11P49959 708 aa15.47■□□□□ 0.07
PDE4A-207ENST00000590407 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
PDE4A-207ENST00000590407 KIF2CQ99661 725 aa15.47■□□□□ 0.07
PDE4A-207ENST00000590407 TECPR2O15040 1411 aa15.46■□□□□ 0.07
PDE4A-207ENST00000590407 NRKQ7Z2Y5 1582 aa15.46■□□□□ 0.07
PDE4A-207ENST00000590407 FBXO31Q5XUX0 539 aaPredicted RBP15.46■□□□□ 0.07
PDE4A-207ENST00000590407 RAB3GAP1Q15042 981 aa15.45■□□□□ 0.06
PDE4A-207ENST00000590407 MBIPQ9NS73 344 aa15.45■□□□□ 0.06
PDE4A-207ENST00000590407 NRXN3Q9Y4C0 1643 aa15.45■□□□□ 0.06
PDE4A-207ENST00000590407 WASLO00401 505 aaPredicted RBP15.44■□□□□ 0.06
PDE4A-207ENST00000590407 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
PDE4A-207ENST00000590407 SKOR2Q2VWA4 1001 aaPredicted RBP15.44■□□□□ 0.06
PDE4A-207ENST00000590407 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 CLEC17AQ6ZS10 378 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 SIRT2Q8IXJ6 389 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 DLG5Q8TDM6 1919 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
PDE4A-207ENST00000590407 TSPYL6Q8N831 410 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 C3P01024 1663 aa15.44■□□□□ 0.06
PDE4A-207ENST00000590407 CDC45O75419 566 aa15.43■□□□□ 0.06
PDE4A-207ENST00000590407 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
PDE4A-207ENST00000590407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDE4A-207ENST00000590407 SPRYD3Q8NCJ5 442 aa15.43■□□□□ 0.06
PDE4A-207ENST00000590407 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
PDE4A-207ENST00000590407 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
PDE4A-207ENST00000590407 HSP90AB1P08238 724 aaKnown RBP15.42■□□□□ 0.06
PDE4A-207ENST00000590407 CPS1P31327 1500 aa15.42■□□□□ 0.06
PDE4A-207ENST00000590407 K7ELQ4 463 aaPredicted RBP15.41■□□□□ 0.06
PDE4A-207ENST00000590407 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
PDE4A-207ENST00000590407 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDE4A-207ENST00000590407 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
PDE4A-207ENST00000590407 HMOX1P09601 288 aa15.41■□□□□ 0.06
PDE4A-207ENST00000590407 WAPLQ7Z5K2 1190 aa15.41■□□□□ 0.06
PDE4A-207ENST00000590407 TNPO1Q92973 898 aaKnown RBP15.41■□□□□ 0.06
PDE4A-207ENST00000590407 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
PDE4A-207ENST00000590407 COG3Q96JB2 828 aa15.4■□□□□ 0.06
PDE4A-207ENST00000590407 RRAGDQ9NQL2 400 aaPredicted RBP15.4■□□□□ 0.06
PDE4A-207ENST00000590407 KIAA0232Q92628 1395 aa15.4■□□□□ 0.06
PDE4A-207ENST00000590407 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
PDE4A-207ENST00000590407 CCDC61Q9Y6R9 512 aa15.39■□□□□ 0.05
PDE4A-207ENST00000590407 ITSN1Q15811 1721 aa15.39■□□□□ 0.05
PDE4A-207ENST00000590407 NME9Q86XW9 330 aa15.39■□□□□ 0.05
PDE4A-207ENST00000590407 C8orf58Q8NAV2 365 aa15.39■□□□□ 0.05
PDE4A-207ENST00000590407 CLCN1P35523 988 aa15.38■□□□□ 0.05
PDE4A-207ENST00000590407 PLEKHM2Q8IWE5 1019 aa15.38■□□□□ 0.05
PDE4A-207ENST00000590407 GRPEL1Q9HAV7 217 aa15.38■□□□□ 0.05
PDE4A-207ENST00000590407 RGS12O14924 1447 aa15.37■□□□□ 0.05
PDE4A-207ENST00000590407 ATP10DQ9P241 1426 aa15.37■□□□□ 0.05
PDE4A-207ENST00000590407 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
PDE4A-207ENST00000590407 RABEP1Q15276 862 aa15.37■□□□□ 0.05
PDE4A-207ENST00000590407 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
PDE4A-207ENST00000590407 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
PDE4A-207ENST00000590407 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
PDE4A-207ENST00000590407 FBLN1P23142 703 aa15.36■□□□□ 0.05
PDE4A-207ENST00000590407 GZF1Q9H116 711 aaPredicted RBP15.36■□□□□ 0.05
PDE4A-207ENST00000590407 C1orf115Q9H7X2 142 aa15.36■□□□□ 0.05
PDE4A-207ENST00000590407 METP08581 1390 aa15.36■□□□□ 0.05
PDE4A-207ENST00000590407 PTPRCP08575 1304 aa15.36■□□□□ 0.05
PDE4A-207ENST00000590407 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
PDE4A-207ENST00000590407 TTC22Q5TAA0 569 aa15.36■□□□□ 0.05
PDE4A-207ENST00000590407 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
PDE4A-207ENST00000590407 CHL1O00533 1208 aa15.35■□□□□ 0.05
PDE4A-207ENST00000590407 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
PDE4A-207ENST00000590407 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
PDE4A-207ENST00000590407 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
PDE4A-207ENST00000590407 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
PDE4A-207ENST00000590407 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
PDE4A-207ENST00000590407 OVOS2A0A0J9YW53 1432 aa15.33■□□□□ 0.05
PDE4A-207ENST00000590407 OVOS2Q6IE36 1432 aa15.33■□□□□ 0.05
PDE4A-207ENST00000590407 NALCNQ8IZF0 1738 aa15.33■□□□□ 0.05
PDE4A-207ENST00000590407 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.04
PDE4A-207ENST00000590407 GOLGA6L22H0YM25 854 aa15.33■□□□□ 0.04
PDE4A-207ENST00000590407 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
PDE4A-207ENST00000590407 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
PDE4A-207ENST00000590407 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
PDE4A-207ENST00000590407 GAS2L2Q8NHY3 880 aa15.31■□□□□ 0.04
PDE4A-207ENST00000590407 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
PDE4A-207ENST00000590407 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
PDE4A-207ENST00000590407 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms