RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 ANKRD36BQ8N2N9 1353 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 ZKSCAN5Q9Y2L8 839 aa19.45■□□□□ 0.7
MBD1-222ENST00000590208 RABEP1Q15276 862 aa19.44■□□□□ 0.7
MBD1-222ENST00000590208 FOXD4L5Q5VV16 416 aaPredicted RBP19.44■□□□□ 0.7
MBD1-222ENST00000590208 FOXD4L4Q8WXT5 416 aaPredicted RBP19.44■□□□□ 0.7
MBD1-222ENST00000590208 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
MBD1-222ENST00000590208 SYCE3A1L190 88 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 C16orf71Q8IYS4 520 aaPredicted RBP19.43■□□□□ 0.7
MBD1-222ENST00000590208 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 ZDHHC9Q9Y397 364 aa19.43■□□□□ 0.7
MBD1-222ENST00000590208 IFT172Q9UG01 1749 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 TSPOAP1O95153 1857 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 PLEKHM2Q8IWE5 1019 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 VWDEQ8N2E2 1590 aa19.42■□□□□ 0.7
MBD1-222ENST00000590208 MAP7D2Q96T17 732 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 MED14O60244 1454 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 USP26Q9BXU7 913 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 NEURL4Q96JN8 1562 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 ZC3H13Q5T200 1668 aaKnown RBP19.41■□□□□ 0.7
MBD1-222ENST00000590208 NSD2O96028 1365 aa19.41■□□□□ 0.7
MBD1-222ENST00000590208 MRPL50Q8N5N7 158 aaKnown RBP19.4■□□□□ 0.7
MBD1-222ENST00000590208 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
MBD1-222ENST00000590208 VAMP4O75379 141 aa19.39■□□□□ 0.7
MBD1-222ENST00000590208 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.7
MBD1-222ENST00000590208 JARID2Q92833 1246 aaPredicted RBP19.39■□□□□ 0.69
MBD1-222ENST00000590208 ADGRB1O14514 1584 aa19.39■□□□□ 0.69
MBD1-222ENST00000590208 COL3A1P02461 1466 aaPredicted RBP19.39■□□□□ 0.69
MBD1-222ENST00000590208 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
MBD1-222ENST00000590208 SETBP1Q9Y6X0 1596 aa19.38■□□□□ 0.69
MBD1-222ENST00000590208 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
MBD1-222ENST00000590208 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
MBD1-222ENST00000590208 FBLN1P23142 703 aa19.38■□□□□ 0.69
MBD1-222ENST00000590208 LRSAM1Q6UWE0 723 aa19.38■□□□□ 0.69
MBD1-222ENST00000590208 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
MBD1-222ENST00000590208 MPNDQ8N594 471 aa19.38■□□□□ 0.69
MBD1-222ENST00000590208 DYNC1I1O14576 645 aa19.37■□□□□ 0.69
MBD1-222ENST00000590208 FYB1O15117 783 aa19.37■□□□□ 0.69
MBD1-222ENST00000590208 TULP4Q9NRJ4 1543 aa19.37■□□□□ 0.69
MBD1-222ENST00000590208 TTC22Q5TAA0 569 aa19.36■□□□□ 0.69
MBD1-222ENST00000590208 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
MBD1-222ENST00000590208 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
MBD1-222ENST00000590208 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 APBB1O00213 710 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
MBD1-222ENST00000590208 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
MBD1-222ENST00000590208 SASS6Q6UVJ0 657 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 TSC1Q92574 1164 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
MBD1-222ENST00000590208 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
MBD1-222ENST00000590208 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
MBD1-222ENST00000590208 ABCC4O15439 1325 aa19.33■□□□□ 0.68
MBD1-222ENST00000590208 ARHGAP45Q92619 1136 aa19.33■□□□□ 0.68
MBD1-222ENST00000590208 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.68
MBD1-222ENST00000590208 STK26Q9P289 416 aa19.33■□□□□ 0.68
MBD1-222ENST00000590208 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 ST18O60284 1047 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 HMOX1P09601 288 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 MCM5P33992 734 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 SMARCA5O60264 1052 aaPredicted RBP19.32■□□□□ 0.68
MBD1-222ENST00000590208 SDSP20132 328 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
MBD1-222ENST00000590208 ADGRB3O60242 1522 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 PTCH1Q13635 1447 aa19.32■□□□□ 0.68
MBD1-222ENST00000590208 PTMAP06454 111 aaKnown RBP19.31■□□□□ 0.68
MBD1-222ENST00000590208 ZHX1Q9UKY1 873 aaPredicted RBP19.31■□□□□ 0.68
MBD1-222ENST00000590208 DCTPP1Q9H773 170 aa19.31■□□□□ 0.68
MBD1-222ENST00000590208 ZNF428Q96B54 188 aa19.31■□□□□ 0.68
MBD1-222ENST00000590208 FOXD4L6Q3SYB3 417 aaPredicted RBP19.3■□□□□ 0.68
MBD1-222ENST00000590208 FOXD4L3Q6VB84 417 aaPredicted RBP19.3■□□□□ 0.68
MBD1-222ENST00000590208 SMAP1Q8IYB5 467 aaPredicted RBP19.3■□□□□ 0.68
MBD1-222ENST00000590208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.3■□□□□ 0.68
MBD1-222ENST00000590208 ZNF830Q96NB3 372 aaPredicted RBP19.3■□□□□ 0.68
MBD1-222ENST00000590208 MBIPQ9NS73 344 aa19.3■□□□□ 0.68
MBD1-222ENST00000590208 FANCAO15360 1455 aa19.3■□□□□ 0.68
MBD1-222ENST00000590208 FCHSD2O94868 740 aa19.29■□□□□ 0.68
MBD1-222ENST00000590208 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
MBD1-222ENST00000590208 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
MBD1-222ENST00000590208 DNTTIP2Q5QJE6 756 aaKnown RBP19.28■□□□□ 0.68
MBD1-222ENST00000590208 MTERF4Q7Z6M4 381 aaKnown RBP19.28■□□□□ 0.68
MBD1-222ENST00000590208 PUS7Q96PZ0 661 aaKnown RBP19.28■□□□□ 0.68
MBD1-222ENST00000590208 DIP2BQ9P265 1576 aa19.28■□□□□ 0.68
MBD1-222ENST00000590208 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
MBD1-222ENST00000590208 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
MBD1-222ENST00000590208 PPLO60437 1756 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 KIAA2012Q0VF49 1180 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 NOL8Q76FK4 1167 aaKnown RBP19.26■□□□□ 0.67
MBD1-222ENST00000590208 ABCA9Q8IUA7 1624 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 GLI2P10070 1586 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 C17orf53Q8N3J3 647 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms