RNA–Protein interactions for RNA: ENST00000589493.1

BECN1-210, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-210ENST00000589493 DCCP43146 1447 aa11.4□□□□□ -0.58
BECN1-210ENST00000589493 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
BECN1-210ENST00000589493 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.59
BECN1-210ENST00000589493 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
BECN1-210ENST00000589493 PPP2R1AP30153 589 aa11.39□□□□□ -0.59
BECN1-210ENST00000589493 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
BECN1-210ENST00000589493 LRRC7Q96NW7 1537 aa11.39□□□□□ -0.59
BECN1-210ENST00000589493 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
BECN1-210ENST00000589493 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
BECN1-210ENST00000589493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.599e-7■□□□□ 9.6
BECN1-210ENST00000589493 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
BECN1-210ENST00000589493 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
BECN1-210ENST00000589493 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
BECN1-210ENST00000589493 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
BECN1-210ENST00000589493 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
BECN1-210ENST00000589493 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
BECN1-210ENST00000589493 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
BECN1-210ENST00000589493 C14orf37Q86TY3 774 aa11.36□□□□□ -0.59
BECN1-210ENST00000589493 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
BECN1-210ENST00000589493 MSH6P52701 1360 aa11.36□□□□□ -0.59
BECN1-210ENST00000589493 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
BECN1-210ENST00000589493 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 USP6P35125 1406 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 TOM1O60784 492 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 ATF3P18847 181 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
BECN1-210ENST00000589493 ORAI2Q96SN7 254 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 MST1RQ04912 1400 aa11.35□□□□□ -0.59
BECN1-210ENST00000589493 ESCO1Q5FWF5 840 aa11.34□□□□□ -0.59
BECN1-210ENST00000589493 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
BECN1-210ENST00000589493 INSRP06213 1382 aa11.33□□□□□ -0.6
BECN1-210ENST00000589493 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
BECN1-210ENST00000589493 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
BECN1-210ENST00000589493 NME9Q86XW9 330 aa11.33□□□□□ -0.6
BECN1-210ENST00000589493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.33□□□□□ -0.6
BECN1-210ENST00000589493 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
BECN1-210ENST00000589493 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
BECN1-210ENST00000589493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
BECN1-210ENST00000589493 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
BECN1-210ENST00000589493 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
BECN1-210ENST00000589493 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
BECN1-210ENST00000589493 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
BECN1-210ENST00000589493 EFCAB3Q8N7B9 438 aa11.31□□□□□ -0.6
BECN1-210ENST00000589493 COG3Q96JB2 828 aa11.31□□□□□ -0.6
BECN1-210ENST00000589493 MTHFSP49914 203 aa11.3□□□□□ -0.6
BECN1-210ENST00000589493 PSME1Q06323 249 aa11.3□□□□□ -0.6
BECN1-210ENST00000589493 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
BECN1-210ENST00000589493 POLKQ9UBT6 870 aa11.3□□□□□ -0.6
BECN1-210ENST00000589493 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
BECN1-210ENST00000589493 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
BECN1-210ENST00000589493 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
BECN1-210ENST00000589493 FOXO3O43524 673 aa11.29□□□□□ -0.6
BECN1-210ENST00000589493 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
BECN1-210ENST00000589493 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
BECN1-210ENST00000589493 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
BECN1-210ENST00000589493 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
BECN1-210ENST00000589493 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
BECN1-210ENST00000589493 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
BECN1-210ENST00000589493 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
BECN1-210ENST00000589493 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
BECN1-210ENST00000589493 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
BECN1-210ENST00000589493 SBNO1A3KN83 1393 aa11.27□□□□□ -0.61
BECN1-210ENST00000589493 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
BECN1-210ENST00000589493 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
BECN1-210ENST00000589493 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
BECN1-210ENST00000589493 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
BECN1-210ENST00000589493 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
BECN1-210ENST00000589493 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
BECN1-210ENST00000589493 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
BECN1-210ENST00000589493 FBLN1P23142 703 aa11.25□□□□□ -0.61
BECN1-210ENST00000589493 NLRP6P59044 892 aa11.25□□□□□ -0.61
BECN1-210ENST00000589493 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
BECN1-210ENST00000589493 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
BECN1-210ENST00000589493 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
BECN1-210ENST00000589493 POTEMA6NI47 508 aa11.24□□□□□ -0.61
BECN1-210ENST00000589493 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
BECN1-210ENST00000589493 ROBO1Q9Y6N7 1651 aa11.24□□□□□ -0.61
BECN1-210ENST00000589493 RGL2O15211 777 aa11.23□□□□□ -0.61
BECN1-210ENST00000589493 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
BECN1-210ENST00000589493 USP19O94966 1318 aa11.23□□□□□ -0.61
BECN1-210ENST00000589493 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
BECN1-210ENST00000589493 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
BECN1-210ENST00000589493 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
BECN1-210ENST00000589493 IL13P35225 146 aa11.22□□□□□ -0.61
BECN1-210ENST00000589493 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
BECN1-210ENST00000589493 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
BECN1-210ENST00000589493 KCNH5Q8NCM2 988 aa11.22□□□□□ -0.61
BECN1-210ENST00000589493 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
BECN1-210ENST00000589493 GCP02774 474 aa11.21□□□□□ -0.61
BECN1-210ENST00000589493 DDX17Q92841 729 aaKnown RBP11.21□□□□□ -0.61
BECN1-210ENST00000589493 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
BECN1-210ENST00000589493 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
BECN1-210ENST00000589493 PXDNQ92626 1479 aa11.2□□□□□ -0.62
BECN1-210ENST00000589493 MAP3K19Q56UN5 1328 aa11.2□□□□□ -0.62
BECN1-210ENST00000589493 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
BECN1-210ENST00000589493 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms