RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 TBC1D2Q9BYX2 928 aa15.17■□□□□ 0.02
AP3D1-206ENST00000589223 VAMP4O75379 141 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 TSHZ3Q63HK5 1081 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 OTUD7AQ8TE49 926 aaPredicted RBP15.16■□□□□ 0.02
AP3D1-206ENST00000589223 FCHSD2O94868 740 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 NLRP1Q9C000 1473 aa15.16■□□□□ 0.02
AP3D1-206ENST00000589223 ARHGEF40Q8TER5 1519 aa15.15■□□□□ 0.02
AP3D1-206ENST00000589223 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
AP3D1-206ENST00000589223 GSE1Q14687 1217 aa15.15■□□□□ 0.02
AP3D1-206ENST00000589223 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
AP3D1-206ENST00000589223 CPS1P31327 1500 aa15.15■□□□□ 0.02
AP3D1-206ENST00000589223 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
AP3D1-206ENST00000589223 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
AP3D1-206ENST00000589223 NGDNQ8NEJ9 315 aaKnown RBP15.14■□□□□ 0.01
AP3D1-206ENST00000589223 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
AP3D1-206ENST00000589223 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
AP3D1-206ENST00000589223 SIRT2Q8IXJ6 389 aa15.13■□□□□ 0.01
AP3D1-206ENST00000589223 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
AP3D1-206ENST00000589223 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
AP3D1-206ENST00000589223 TNRQ92752 1358 aa15.13■□□□□ 0.01
AP3D1-206ENST00000589223 C22orf23Q9BZE7 217 aa15.12■□□□□ 0.01
AP3D1-206ENST00000589223 KIF13AQ9H1H9 1805 aa15.12■□□□□ 0.01
AP3D1-206ENST00000589223 NSD2O96028 1365 aa15.11■□□□□ 0.01
AP3D1-206ENST00000589223 G2E3Q7L622 706 aa15.11■□□□□ 0.01
AP3D1-206ENST00000589223 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
AP3D1-206ENST00000589223 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
AP3D1-206ENST00000589223 DTNBO60941 627 aa15.1■□□□□ 0.01
AP3D1-206ENST00000589223 NGEFQ8N5V2 710 aa15.1■□□□□ 0.01
AP3D1-206ENST00000589223 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
AP3D1-206ENST00000589223 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
AP3D1-206ENST00000589223 CD2BP2O95400 341 aaKnown RBP15.09■□□□□ 0.01
AP3D1-206ENST00000589223 MAP2P11137 1827 aaKnown RBP15.09■□□□□ 0.01
AP3D1-206ENST00000589223 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0.01
AP3D1-206ENST00000589223 IPO8O15397 1037 aaKnown RBP15.08■□□□□ 0.01
AP3D1-206ENST00000589223 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0.01
AP3D1-206ENST00000589223 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
AP3D1-206ENST00000589223 AMPHP49418 695 aa15.08■□□□□ 0
AP3D1-206ENST00000589223 GLIPR1L2Q4G1C9 344 aa15.08■□□□□ 0
AP3D1-206ENST00000589223 CHD1LQ86WJ1 897 aa15.08■□□□□ 0
AP3D1-206ENST00000589223 NLRP6P59044 892 aa15.08■□□□□ 0
AP3D1-206ENST00000589223 TPRNQ4KMQ1 711 aa15.08■□□□□ 0
AP3D1-206ENST00000589223 MEIS3Q99687 375 aa15.07■□□□□ 0
AP3D1-206ENST00000589223 TMEM2Q9UHN6 1383 aa15.07■□□□□ 0
AP3D1-206ENST00000589223 ANXA1P04083 346 aa15.07■□□□□ 0
AP3D1-206ENST00000589223 SLC4A2P04920 1241 aa15.07■□□□□ 0
AP3D1-206ENST00000589223 KIF16BQ96L93 1317 aa15.07■□□□□ 0
AP3D1-206ENST00000589223 GNAI1P63096 354 aa15.06■□□□□ 0
AP3D1-206ENST00000589223 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
AP3D1-206ENST00000589223 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.06■□□□□ 0
AP3D1-206ENST00000589223 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
AP3D1-206ENST00000589223 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
AP3D1-206ENST00000589223 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
AP3D1-206ENST00000589223 BECN1Q14457 450 aa15.05■□□□□ 0
AP3D1-206ENST00000589223 PNPLA6Q8IY17 1366 aa15.05■□□□□ 0
AP3D1-206ENST00000589223 NRXN3Q9Y4C0 1643 aa15.05■□□□□ 0
AP3D1-206ENST00000589223 NOL8Q76FK4 1167 aaKnown RBP15.05■□□□□ -0
AP3D1-206ENST00000589223 CHAMP1Q96JM3 812 aa15.05■□□□□ -0
AP3D1-206ENST00000589223 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
AP3D1-206ENST00000589223 KCNA6P17658 529 aa15.04■□□□□ -0
AP3D1-206ENST00000589223 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
AP3D1-206ENST00000589223 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
AP3D1-206ENST00000589223 SMC5Q8IY18 1101 aa15.04■□□□□ -0
AP3D1-206ENST00000589223 CFAP44Q96MT7 982 aa15.04■□□□□ -0
AP3D1-206ENST00000589223 ZMYND15Q9H091 742 aa15.04■□□□□ -0
AP3D1-206ENST00000589223 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
AP3D1-206ENST00000589223 PTPRUQ92729 1446 aa15.03■□□□□ -0
AP3D1-206ENST00000589223 NUCB1Q02818 461 aa15.03■□□□□ -0
AP3D1-206ENST00000589223 HSP90AA1P07900 732 aaKnown RBP15.02■□□□□ -0
AP3D1-206ENST00000589223 EIF2S2P20042 333 aaKnown RBP15.02■□□□□ -0
AP3D1-206ENST00000589223 EXOC6BQ9Y2D4 811 aa15.02■□□□□ -0
AP3D1-206ENST00000589223 EID1Q9Y6B2 187 aa15.02■□□□□ -0
AP3D1-206ENST00000589223 HDAC1Q13547 482 aaPredicted RBP15.02□□□□□ -0.01
AP3D1-206ENST00000589223 EYA1Q99502 592 aa15.02□□□□□ -0.01
AP3D1-206ENST00000589223 ADAMTS13Q76LX8 1427 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 TBC1D9Q6ZT07 1266 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
AP3D1-206ENST00000589223 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 AGLP35573 1532 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 ABTB2Q8N961 1025 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
AP3D1-206ENST00000589223 MED14O60244 1454 aa15□□□□□ -0.01
AP3D1-206ENST00000589223 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
AP3D1-206ENST00000589223 USP32Q8NFA0 1604 aa15□□□□□ -0.01
AP3D1-206ENST00000589223 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
AP3D1-206ENST00000589223 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
AP3D1-206ENST00000589223 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 CPSF1Q10570 1443 aaKnown RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 FOXD4L6Q3SYB3 417 aaPredicted RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 FOXD4L3Q6VB84 417 aaPredicted RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 LRRC59Q96AG4 307 aaKnown RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
AP3D1-206ENST00000589223 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
AP3D1-206ENST00000589223 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
AP3D1-206ENST00000589223 MSH6P52701 1360 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms