RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 FOXO3O43524 673 aa21.6■■□□□ 1.05
NFIX-210ENST00000588228 CADPS2Q86UW7 1296 aa21.6■■□□□ 1.05
NFIX-210ENST00000588228 RIPK4P57078 832 aa21.59■■□□□ 1.05
NFIX-210ENST00000588228 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
NFIX-210ENST00000588228 MSH6P52701 1360 aa21.58■■□□□ 1.05
NFIX-210ENST00000588228 AMPHP49418 695 aa21.58■■□□□ 1.05
NFIX-210ENST00000588228 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
NFIX-210ENST00000588228 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
NFIX-210ENST00000588228 IL16Q14005 1332 aa21.56■■□□□ 1.04
NFIX-210ENST00000588228 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
NFIX-210ENST00000588228 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
NFIX-210ENST00000588228 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
NFIX-210ENST00000588228 ARHGEF10O15013 1369 aa21.55■■□□□ 1.04
NFIX-210ENST00000588228 KRT28Q7Z3Y7 464 aa21.54■■□□□ 1.04
NFIX-210ENST00000588228 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
NFIX-210ENST00000588228 RGPD1P0DJD0 1748 aa21.54■■□□□ 1.04
NFIX-210ENST00000588228 HOXC9P31274 260 aa21.53■■□□□ 1.04
NFIX-210ENST00000588228 NFAT5O94916 1531 aa21.53■■□□□ 1.04
NFIX-210ENST00000588228 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
NFIX-210ENST00000588228 TRPM3Q9HCF6 1732 aaPredicted RBP21.53■■□□□ 1.04
NFIX-210ENST00000588228 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.04
NFIX-210ENST00000588228 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
NFIX-210ENST00000588228 AEBP1Q8IUX7 1158 aa21.5■■□□□ 1.03
NFIX-210ENST00000588228 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.5■■□□□ 1.03
NFIX-210ENST00000588228 SLIT3O75094 1523 aa21.5■■□□□ 1.03
NFIX-210ENST00000588228 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
NFIX-210ENST00000588228 USP19O94966 1318 aa21.49■■□□□ 1.03
NFIX-210ENST00000588228 IGSF1Q8N6C5 1336 aa21.49■■□□□ 1.03
NFIX-210ENST00000588228 NPHP3Q7Z494 1330 aa21.48■■□□□ 1.03
NFIX-210ENST00000588228 CALD1Q05682 793 aaKnown RBP21.48■■□□□ 1.03
NFIX-210ENST00000588228 XIRP1Q702N8 1843 aaKnown RBP21.48■■□□□ 1.03
NFIX-210ENST00000588228 KDRP35968 1356 aa21.48■■□□□ 1.03
NFIX-210ENST00000588228 FANCIQ9NVI1 1328 aa21.48■■□□□ 1.03
NFIX-210ENST00000588228 PLIN1O60240 522 aa21.47■■□□□ 1.03
NFIX-210ENST00000588228 IP6K1Q92551 441 aa21.47■■□□□ 1.03
NFIX-210ENST00000588228 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
NFIX-210ENST00000588228 EYA1Q99502 592 aa21.47■■□□□ 1.03
NFIX-210ENST00000588228 GCP02774 474 aa21.46■■□□□ 1.03
NFIX-210ENST00000588228 PHRF1Q9P1Y6 1649 aaKnown RBP21.45■■□□□ 1.02
NFIX-210ENST00000588228 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
NFIX-210ENST00000588228 ALS2Q96Q42 1657 aa21.44■■□□□ 1.02
NFIX-210ENST00000588228 EXOC6Q8TAG9 804 aa21.44■■□□□ 1.02
NFIX-210ENST00000588228 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
NFIX-210ENST00000588228 LTN1O94822 1766 aa21.42■■□□□ 1.02
NFIX-210ENST00000588228 BCAR3O75815 825 aa21.42■■□□□ 1.02
NFIX-210ENST00000588228 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
NFIX-210ENST00000588228 B4GALNT3Q6L9W6 998 aa21.42■■□□□ 1.02
NFIX-210ENST00000588228 ARHGEF25Q86VW2 580 aa21.42■■□□□ 1.02
NFIX-210ENST00000588228 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
NFIX-210ENST00000588228 IFT57Q9NWB7 429 aa21.4■■□□□ 1.02
NFIX-210ENST00000588228 PXDNQ92626 1479 aa21.4■■□□□ 1.02
NFIX-210ENST00000588228 TNS3Q68CZ2 1445 aa21.4■■□□□ 1.02
NFIX-210ENST00000588228 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
NFIX-210ENST00000588228 GNAI1P63096 354 aa21.39■■□□□ 1.01
NFIX-210ENST00000588228 EXOSC9Q06265 439 aaKnown RBP21.39■■□□□ 1.01
NFIX-210ENST00000588228 C20orf194Q5TEA3 1177 aa21.38■■□□□ 1.01
NFIX-210ENST00000588228 LTV1Q96GA3 475 aaPredicted RBP21.38■■□□□ 1.01
NFIX-210ENST00000588228 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
NFIX-210ENST00000588228 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
NFIX-210ENST00000588228 THUMPD2Q9BTF0 503 aaKnown RBP21.38■■□□□ 1.01
NFIX-210ENST00000588228 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
NFIX-210ENST00000588228 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
NFIX-210ENST00000588228 MED1Q15648 1581 aaPredicted RBP21.37■■□□□ 1.01
NFIX-210ENST00000588228 GAS2L2Q8NHY3 880 aa21.37■■□□□ 1.01
NFIX-210ENST00000588228 SPATA31A3Q5VYP0 1347 aa21.37■■□□□ 1.01
NFIX-210ENST00000588228 ZBTB7CA1YPR0 619 aa21.36■■□□□ 1.01
NFIX-210ENST00000588228 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
NFIX-210ENST00000588228 FAM83GA6ND36 823 aa21.35■■□□□ 1.01
NFIX-210ENST00000588228 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
NFIX-210ENST00000588228 DLG5Q8TDM6 1919 aa21.35■■□□□ 1.01
NFIX-210ENST00000588228 PDE3AQ14432 1141 aa21.34■■□□□ 1.01
NFIX-210ENST00000588228 LAS1LQ9Y4W2 734 aaKnown RBP21.34■■□□□ 1.01
NFIX-210ENST00000588228 CANXP27824 592 aaKnown RBP21.33■■□□□ 1
NFIX-210ENST00000588228 DCTN1Q14203 1278 aa21.33■■□□□ 1
NFIX-210ENST00000588228 PLEKHG5O94827 1062 aa21.32■■□□□ 1
NFIX-210ENST00000588228 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
NFIX-210ENST00000588228 ZNF428Q96B54 188 aa21.32■■□□□ 1
NFIX-210ENST00000588228 NBPF4Q96M43 638 aa21.32■■□□□ 1
NFIX-210ENST00000588228 MBIPQ9NS73 344 aa21.32■■□□□ 1
NFIX-210ENST00000588228 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
NFIX-210ENST00000588228 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
NFIX-210ENST00000588228 NCAPD2Q15021 1401 aa21.3■■□□□ 1
NFIX-210ENST00000588228 ANKRD24Q8TF21 1146 aa21.3■■□□□ 1
NFIX-210ENST00000588228 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
NFIX-210ENST00000588228 ALDH1L2Q3SY69 923 aa21.29■■□□□ 1
NFIX-210ENST00000588228 MCM10Q7L590 875 aa21.29■■□□□ 1
NFIX-210ENST00000588228 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
NFIX-210ENST00000588228 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
NFIX-210ENST00000588228 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
NFIX-210ENST00000588228 CRB1P82279 1406 aa21.28■■□□□ 1
NFIX-210ENST00000588228 ZC3H6P61129 1189 aaKnown RBP21.28■■□□□ 1
NFIX-210ENST00000588228 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
NFIX-210ENST00000588228 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
NFIX-210ENST00000588228 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
NFIX-210ENST00000588228 ABCC6O95255 1503 aa21.28■■□□□ 1
NFIX-210ENST00000588228 CHL1O00533 1208 aa21.27■■□□□ 1
NFIX-210ENST00000588228 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
NFIX-210ENST00000588228 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
NFIX-210ENST00000588228 CPDO75976 1380 aa21.26■□□□□ 0.99
NFIX-210ENST00000588228 ERBB3P21860 1342 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms