RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
CIRBP-212ENST00000587169 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
CIRBP-212ENST00000587169 YTHDC2Q9H6S0 1430 aaKnown RBP21.04■□□□□ 0.96
CIRBP-212ENST00000587169 MRE11P49959 708 aa21.04■□□□□ 0.96
CIRBP-212ENST00000587169 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
CIRBP-212ENST00000587169 SLC52A1Q9NWF4 448 aa21.03■□□□□ 0.96
CIRBP-212ENST00000587169 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
CIRBP-212ENST00000587169 NCOA3Q9Y6Q9 1424 aa21.02■□□□□ 0.96
CIRBP-212ENST00000587169 PIK3C2BO00750 1634 aa21.02■□□□□ 0.95
CIRBP-212ENST00000587169 NME9Q86XW9 330 aa21.02■□□□□ 0.95
CIRBP-212ENST00000587169 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.95
CIRBP-212ENST00000587169 NAP1L5Q96NT1 182 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-212ENST00000587169 SSFA2P28290 1259 aa21.01■□□□□ 0.95
CIRBP-212ENST00000587169 CEBPAP49715 358 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-212ENST00000587169 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-212ENST00000587169 RAB3GAP1Q15042 981 aa21■□□□□ 0.95
CIRBP-212ENST00000587169 TWISTNBQ3B726 338 aaPredicted RBP21■□□□□ 0.95
CIRBP-212ENST00000587169 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
CIRBP-212ENST00000587169 GCC1Q96CN9 775 aa21■□□□□ 0.95
CIRBP-212ENST00000587169 RRS1Q15050 365 aaKnown RBP21■□□□□ 0.95
CIRBP-212ENST00000587169 FAM135BQ49AJ0 1406 aa20.99■□□□□ 0.95
CIRBP-212ENST00000587169 APBB1O00213 710 aa20.99■□□□□ 0.95
CIRBP-212ENST00000587169 GSPT1P15170 499 aaKnown RBP20.99■□□□□ 0.95
CIRBP-212ENST00000587169 KRT24Q2M2I5 525 aa20.99■□□□□ 0.95
CIRBP-212ENST00000587169 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
CIRBP-212ENST00000587169 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-212ENST00000587169 GNAI1P63096 354 aa20.97■□□□□ 0.95
CIRBP-212ENST00000587169 GBP4Q96PP9 640 aa20.97■□□□□ 0.95
CIRBP-212ENST00000587169 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
CIRBP-212ENST00000587169 IL13P35225 146 aa20.96■□□□□ 0.95
CIRBP-212ENST00000587169 MYO5BQ9ULV0 1848 aa20.96■□□□□ 0.95
CIRBP-212ENST00000587169 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
CIRBP-212ENST00000587169 MED14O60244 1454 aa20.95■□□□□ 0.94
CIRBP-212ENST00000587169 CLCN1P35523 988 aa20.95■□□□□ 0.94
CIRBP-212ENST00000587169 IFT57Q9NWB7 429 aa20.95■□□□□ 0.94
CIRBP-212ENST00000587169 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
CIRBP-212ENST00000587169 ABCC4O15439 1325 aa20.94■□□□□ 0.94
CIRBP-212ENST00000587169 ZNF853P0CG23 659 aa20.94■□□□□ 0.94
CIRBP-212ENST00000587169 ARHGAP45Q92619 1136 aa20.94■□□□□ 0.94
CIRBP-212ENST00000587169 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-212ENST00000587169 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
CIRBP-212ENST00000587169 PLEKHM2Q8IWE5 1019 aa20.94■□□□□ 0.94
CIRBP-212ENST00000587169 ZNF428Q96B54 188 aa20.93■□□□□ 0.94
CIRBP-212ENST00000587169 CDC45O75419 566 aa20.93■□□□□ 0.94
CIRBP-212ENST00000587169 RBM33Q96EV2 1170 aaKnown RBP20.93■□□□□ 0.94
CIRBP-212ENST00000587169 SMARCA5O60264 1052 aaPredicted RBP20.92■□□□□ 0.94
CIRBP-212ENST00000587169 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
CIRBP-212ENST00000587169 CFAP74Q9C0B2 1584 aa20.91■□□□□ 0.94
CIRBP-212ENST00000587169 CFAP44Q96MT7 982 aa20.91■□□□□ 0.94
CIRBP-212ENST00000587169 ESPNB1AK53 854 aa20.91■□□□□ 0.94
CIRBP-212ENST00000587169 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
CIRBP-212ENST00000587169 DIP2CQ9Y2E4 1556 aa20.9■□□□□ 0.94
CIRBP-212ENST00000587169 PIK3R4Q99570 1358 aa20.9■□□□□ 0.94
CIRBP-212ENST00000587169 AEBP1Q8IUX7 1158 aa20.9■□□□□ 0.94
CIRBP-212ENST00000587169 CALD1Q05682 793 aaKnown RBP20.9■□□□□ 0.94
CIRBP-212ENST00000587169 PKP1Q13835 747 aa20.9■□□□□ 0.94
CIRBP-212ENST00000587169 ESF1Q9H501 851 aaKnown RBP20.9■□□□□ 0.94
CIRBP-212ENST00000587169 API5Q9BZZ5 524 aaKnown RBP20.88■□□□□ 0.93
CIRBP-212ENST00000587169 CHMP4BQ9H444 224 aaKnown RBP20.88■□□□□ 0.93
CIRBP-212ENST00000587169 TRIM44Q96DX7 344 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-212ENST00000587169 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
CIRBP-212ENST00000587169 TMEM131LA2VDJ0 1609 aa20.87■□□□□ 0.93
CIRBP-212ENST00000587169 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
CIRBP-212ENST00000587169 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
CIRBP-212ENST00000587169 BAG4O95429 457 aaKnown RBP20.87■□□□□ 0.93
CIRBP-212ENST00000587169 CHAMP1Q96JM3 812 aa20.87■□□□□ 0.93
CIRBP-212ENST00000587169 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
CIRBP-212ENST00000587169 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
CIRBP-212ENST00000587169 DCTPP1Q9H773 170 aa20.86■□□□□ 0.93
CIRBP-212ENST00000587169 MCM10Q7L590 875 aa20.86■□□□□ 0.93
CIRBP-212ENST00000587169 UBE2Q2Q8WVN8 375 aa20.86■□□□□ 0.93
CIRBP-212ENST00000587169 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
CIRBP-212ENST00000587169 MCTP1Q6DN14 999 aa20.86■□□□□ 0.93
CIRBP-212ENST00000587169 SKOR2Q2VWA4 1001 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-212ENST00000587169 MAP2P11137 1827 aaKnown RBP20.85■□□□□ 0.93
CIRBP-212ENST00000587169 AK9Q5TCS8 1911 aa20.84■□□□□ 0.93
CIRBP-212ENST00000587169 COG3Q96JB2 828 aa20.84■□□□□ 0.93
CIRBP-212ENST00000587169 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
CIRBP-212ENST00000587169 USP26Q9BXU7 913 aa20.84■□□□□ 0.93
CIRBP-212ENST00000587169 WASLO00401 505 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-212ENST00000587169 SDSP20132 328 aa20.83■□□□□ 0.93
CIRBP-212ENST00000587169 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
CIRBP-212ENST00000587169 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.92
CIRBP-212ENST00000587169 ZGPATQ8N5A5 531 aaKnown RBP20.83■□□□□ 0.92
CIRBP-212ENST00000587169 MEIS3Q99687 375 aa20.83■□□□□ 0.92
CIRBP-212ENST00000587169 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
CIRBP-212ENST00000587169 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
CIRBP-212ENST00000587169 KIF20BQ96Q89 1820 aa20.82■□□□□ 0.92
CIRBP-212ENST00000587169 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-212ENST00000587169 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-212ENST00000587169 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
CIRBP-212ENST00000587169 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
CIRBP-212ENST00000587169 GOLGA6L22H0YM25 854 aa20.81■□□□□ 0.92
CIRBP-212ENST00000587169 NUTM2GQ5VZR2 741 aa20.8■□□□□ 0.92
CIRBP-212ENST00000587169 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
CIRBP-212ENST00000587169 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-212ENST00000587169 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
CIRBP-212ENST00000587169 RABEP1Q15276 862 aa20.8■□□□□ 0.92
CIRBP-212ENST00000587169 CAVIN1Q6NZI2 390 aaKnown RBP20.8■□□□□ 0.92
CIRBP-212ENST00000587169 ANKRD44Q8N8A2 993 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms