RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 LNPKQ9C0E8 428 aa11.36□□□□□ -0.59
LAMA3-206ENST00000586751 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
LAMA3-206ENST00000586751 FAM83GA6ND36 823 aa11.35□□□□□ -0.59
LAMA3-206ENST00000586751 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
LAMA3-206ENST00000586751 DDIT3P35638 169 aa11.35□□□□□ -0.59
LAMA3-206ENST00000586751 NUCB1Q02818 461 aa11.35□□□□□ -0.59
LAMA3-206ENST00000586751 IL16Q14005 1332 aa11.35□□□□□ -0.59
LAMA3-206ENST00000586751 VAMP4O75379 141 aa11.34□□□□□ -0.59
LAMA3-206ENST00000586751 NME9Q86XW9 330 aa11.34□□□□□ -0.59
LAMA3-206ENST00000586751 CHMP4BQ9H444 224 aaKnown RBP11.34□□□□□ -0.59
LAMA3-206ENST00000586751 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
LAMA3-206ENST00000586751 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
LAMA3-206ENST00000586751 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
LAMA3-206ENST00000586751 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
LAMA3-206ENST00000586751 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
LAMA3-206ENST00000586751 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 IL13P35225 146 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 DCTN1Q14203 1278 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 BECN1Q14457 450 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 NCOA3Q9Y6Q9 1424 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 A2ML1A8K2U0 1454 aa11.33□□□□□ -0.6
LAMA3-206ENST00000586751 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
LAMA3-206ENST00000586751 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 METP08581 1390 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
LAMA3-206ENST00000586751 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
LAMA3-206ENST00000586751 FCHSD2O94868 740 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
LAMA3-206ENST00000586751 RRS1Q15050 365 aaKnown RBP11.32□□□□□ -0.6
LAMA3-206ENST00000586751 MCM4P33991 863 aa11.31□□□□□ -0.6
LAMA3-206ENST00000586751 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
LAMA3-206ENST00000586751 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
LAMA3-206ENST00000586751 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
LAMA3-206ENST00000586751 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
LAMA3-206ENST00000586751 XRCC6P12956 609 aaKnown RBP eCLIP11.3□□□□□ -0.6
LAMA3-206ENST00000586751 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
LAMA3-206ENST00000586751 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
LAMA3-206ENST00000586751 ALDH1L2Q3SY69 923 aa11.29□□□□□ -0.6
LAMA3-206ENST00000586751 TSPOAP1O95153 1857 aa11.29□□□□□ -0.6
LAMA3-206ENST00000586751 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
LAMA3-206ENST00000586751 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-206ENST00000586751 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-206ENST00000586751 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
LAMA3-206ENST00000586751 ATP7BP35670 1465 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 ABCC4O15439 1325 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 RGS12O14924 1447 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
LAMA3-206ENST00000586751 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
LAMA3-206ENST00000586751 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
LAMA3-206ENST00000586751 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
LAMA3-206ENST00000586751 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
LAMA3-206ENST00000586751 C3P01024 1663 aa11.27□□□□□ -0.6
LAMA3-206ENST00000586751 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
LAMA3-206ENST00000586751 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 AK9Q5TCS8 1911 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 SPATA31D1Q6ZQQ2 1576 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
LAMA3-206ENST00000586751 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
LAMA3-206ENST00000586751 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
LAMA3-206ENST00000586751 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
LAMA3-206ENST00000586751 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
LAMA3-206ENST00000586751 AKAP12Q02952 1782 aa11.25□□□□□ -0.61
LAMA3-206ENST00000586751 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-206ENST00000586751 GAS2L3Q86XJ1 694 aa11.25□□□□□ -0.61
LAMA3-206ENST00000586751 MLECQ14165 292 aa11.25□□□□□ -0.61
LAMA3-206ENST00000586751 BMP2KLQ5H9B9 411 aa11.25□□□□□ -0.61
LAMA3-206ENST00000586751 TRAK2O60296 914 aa11.24□□□□□ -0.61
LAMA3-206ENST00000586751 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-206ENST00000586751 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
LAMA3-206ENST00000586751 CHMP5Q9NZZ3 219 aa11.24□□□□□ -0.61
LAMA3-206ENST00000586751 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
LAMA3-206ENST00000586751 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
LAMA3-206ENST00000586751 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
LAMA3-206ENST00000586751 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
LAMA3-206ENST00000586751 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
LAMA3-206ENST00000586751 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
LAMA3-206ENST00000586751 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
LAMA3-206ENST00000586751 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
LAMA3-206ENST00000586751 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-206ENST00000586751 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 SNX21Q969T3 373 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 MCM10Q7L590 875 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 ARHGAP45Q92619 1136 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
LAMA3-206ENST00000586751 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
LAMA3-206ENST00000586751 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
LAMA3-206ENST00000586751 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.61
LAMA3-206ENST00000586751 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
LAMA3-206ENST00000586751 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms