RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 HSP90AB2PQ58FF8 381 aa28.92■■■□□ 2.22
CIRBP-208ENST00000586548 NCOA3Q9Y6Q9 1424 aa28.92■■■□□ 2.22
CIRBP-208ENST00000586548 KIF1AQ12756 1690 aa28.92■■■□□ 2.22
CIRBP-208ENST00000586548 PAK3O75914 559 aaPredicted RBP28.91■■■□□ 2.22
CIRBP-208ENST00000586548 BCAR3O75815 825 aa28.91■■■□□ 2.22
CIRBP-208ENST00000586548 CT47B1P0C2W7 299 aaPredicted RBP28.91■■■□□ 2.22
CIRBP-208ENST00000586548 C19orf44Q9H6X5 657 aa28.91■■■□□ 2.22
CIRBP-208ENST00000586548 FANCIQ9NVI1 1328 aa28.9■■■□□ 2.22
CIRBP-208ENST00000586548 HSPA2P54652 639 aa28.9■■■□□ 2.22
CIRBP-208ENST00000586548 C20orf194Q5TEA3 1177 aa28.9■■■□□ 2.22
CIRBP-208ENST00000586548 TSHZ2Q9NRE2 1034 aa28.89■■■□□ 2.22
CIRBP-208ENST00000586548 ARHGEF10O15013 1369 aa28.89■■■□□ 2.22
CIRBP-208ENST00000586548 DLG5Q8TDM6 1919 aa28.89■■■□□ 2.22
CIRBP-208ENST00000586548 PSME1Q06323 249 aa28.89■■■□□ 2.21
CIRBP-208ENST00000586548 DCCP43146 1447 aa28.88■■■□□ 2.21
CIRBP-208ENST00000586548 AMPHP49418 695 aa28.88■■■□□ 2.21
CIRBP-208ENST00000586548 C1orf167Q5SNV9 1468 aa28.87■■■□□ 2.21
CIRBP-208ENST00000586548 RARSP54136 660 aaKnown RBP28.87■■■□□ 2.21
CIRBP-208ENST00000586548 CALD1Q05682 793 aaKnown RBP28.86■■■□□ 2.21
CIRBP-208ENST00000586548 LMOD3Q0VAK6 560 aa28.86■■■□□ 2.21
CIRBP-208ENST00000586548 NUTM2GQ5VZR2 741 aa28.86■■■□□ 2.21
CIRBP-208ENST00000586548 SULT6B1Q6IMI4 303 aa28.86■■■□□ 2.21
CIRBP-208ENST00000586548 TMEM94Q12767 1356 aa28.85■■■□□ 2.21
CIRBP-208ENST00000586548 ORAI2Q96SN7 254 aa28.85■■■□□ 2.21
CIRBP-208ENST00000586548 TSR2Q969E8 191 aaKnown RBP28.84■■■□□ 2.21
CIRBP-208ENST00000586548 RTL1A6NKG5 1358 aa28.84■■■□□ 2.21
CIRBP-208ENST00000586548 AEBP1Q8IUX7 1158 aa28.83■■■□□ 2.21
CIRBP-208ENST00000586548 NFAT5O94916 1531 aa28.83■■■□□ 2.21
CIRBP-208ENST00000586548 TRPM3Q9HCF6 1732 aaPredicted RBP28.82■■■□□ 2.2
CIRBP-208ENST00000586548 LTN1O94822 1766 aa28.82■■■□□ 2.2
CIRBP-208ENST00000586548 STRCQ7RTU9 1775 aa28.81■■■□□ 2.2
CIRBP-208ENST00000586548 PDE3AQ14432 1141 aa28.81■■■□□ 2.2
CIRBP-208ENST00000586548 HOXC9P31274 260 aa28.8■■■□□ 2.2
CIRBP-208ENST00000586548 KDRP35968 1356 aa28.8■■■□□ 2.2
CIRBP-208ENST00000586548 EXOSC9Q06265 439 aaKnown RBP28.8■■■□□ 2.2
CIRBP-208ENST00000586548 MST1RQ04912 1400 aa28.79■■■□□ 2.2
CIRBP-208ENST00000586548 IGSF1Q8N6C5 1336 aa28.79■■■□□ 2.2
CIRBP-208ENST00000586548 PHRF1Q9P1Y6 1649 aaKnown RBP28.78■■■□□ 2.2
CIRBP-208ENST00000586548 ATF3P18847 181 aa28.78■■■□□ 2.2
CIRBP-208ENST00000586548 FOXO3O43524 673 aa28.77■■■□□ 2.2
CIRBP-208ENST00000586548 CANXP27824 592 aaKnown RBP28.77■■■□□ 2.2
CIRBP-208ENST00000586548 KCNH5Q8NCM2 988 aa28.77■■■□□ 2.2
CIRBP-208ENST00000586548 IFT57Q9NWB7 429 aa28.77■■■□□ 2.2
CIRBP-208ENST00000586548 SLIT3O75094 1523 aa28.77■■■□□ 2.2
CIRBP-208ENST00000586548 GNAI1P63096 354 aa28.76■■■□□ 2.19
CIRBP-208ENST00000586548 EYA1Q99502 592 aa28.74■■■□□ 2.19
CIRBP-208ENST00000586548 ZNF853P0CG23 659 aa28.72■■■□□ 2.19
CIRBP-208ENST00000586548 KRT28Q7Z3Y7 464 aa28.72■■■□□ 2.19
CIRBP-208ENST00000586548 XIRP1Q702N8 1843 aaKnown RBP28.72■■■□□ 2.19
CIRBP-208ENST00000586548 CADPS2Q86UW7 1296 aa28.72■■■□□ 2.19
CIRBP-208ENST00000586548 THUMPD2Q9BTF0 503 aaKnown RBP28.72■■■□□ 2.19
CIRBP-208ENST00000586548 FRAT1Q92837 279 aaPredicted RBP28.71■■■□□ 2.19
CIRBP-208ENST00000586548 MSH6P52701 1360 aa28.7■■■□□ 2.19
CIRBP-208ENST00000586548 IP6K1Q92551 441 aa28.7■■■□□ 2.19
CIRBP-208ENST00000586548 ALS2Q96Q42 1657 aa28.7■■■□□ 2.18
CIRBP-208ENST00000586548 XPCQ01831 940 aaPredicted RBP28.69■■■□□ 2.18
CIRBP-208ENST00000586548 CFAP44Q96MT7 982 aa28.69■■■□□ 2.18
CIRBP-208ENST00000586548 BCL2L13Q9BXK5 485 aa28.69■■■□□ 2.18
CIRBP-208ENST00000586548 USP19O94966 1318 aa28.69■■■□□ 2.18
CIRBP-208ENST00000586548 ZNF428Q96B54 188 aa28.69■■■□□ 2.18
CIRBP-208ENST00000586548 LAS1LQ9Y4W2 734 aaKnown RBP28.69■■■□□ 2.18
CIRBP-208ENST00000586548 SMC4Q9NTJ3 1288 aa28.67■■■□□ 2.18
CIRBP-208ENST00000586548 FAM83GA6ND36 823 aa28.66■■■□□ 2.18
CIRBP-208ENST00000586548 ALDH1L2Q3SY69 923 aa28.66■■■□□ 2.18
CIRBP-208ENST00000586548 PANK1Q8TE04 598 aa28.66■■■□□ 2.18
CIRBP-208ENST00000586548 SSH1Q8WYL5 1049 aa28.65■■■□□ 2.18
CIRBP-208ENST00000586548 MBIPQ9NS73 344 aa28.65■■■□□ 2.18
CIRBP-208ENST00000586548 GCP02774 474 aa28.64■■■□□ 2.18
CIRBP-208ENST00000586548 ZKSCAN2Q63HK3 967 aa28.64■■■□□ 2.18
CIRBP-208ENST00000586548 MS4A1P11836 297 aa28.63■■■□□ 2.17
CIRBP-208ENST00000586548 GAS2L2Q8NHY3 880 aa28.63■■■□□ 2.17
CIRBP-208ENST00000586548 AAMPQ13685 434 aa28.63■■■□□ 2.17
CIRBP-208ENST00000586548 DCTN1Q14203 1278 aa28.63■■■□□ 2.17
CIRBP-208ENST00000586548 MTHFSDQ2M296 383 aaKnown RBP28.62■■■□□ 2.17
CIRBP-208ENST00000586548 KDM2BQ8NHM5 1336 aa28.61■■■□□ 2.17
CIRBP-208ENST00000586548 ARHGEF25Q86VW2 580 aa28.61■■■□□ 2.17
CIRBP-208ENST00000586548 COG6Q9Y2V7 657 aa28.61■■■□□ 2.17
CIRBP-208ENST00000586548 KIF16BQ96L93 1317 aa28.61■■■□□ 2.17
CIRBP-208ENST00000586548 LMOD2Q6P5Q4 547 aa28.6■■■□□ 2.17
CIRBP-208ENST00000586548 LTV1Q96GA3 475 aaPredicted RBP28.6■■■□□ 2.17
CIRBP-208ENST00000586548 NPHP3Q7Z494 1330 aa28.6■■■□□ 2.17
CIRBP-208ENST00000586548 BRPF1P55201 1214 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-208ENST00000586548 CENPQQ7L2Z9 268 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-208ENST00000586548 RLBP1P12271 317 aa28.58■■■□□ 2.17
CIRBP-208ENST00000586548 VAMP4O75379 141 aa28.57■■■□□ 2.16
CIRBP-208ENST00000586548 CRB1P82279 1406 aa28.57■■■□□ 2.16
CIRBP-208ENST00000586548 HTATSF1O43719 755 aaKnown RBP28.57■■■□□ 2.16
CIRBP-208ENST00000586548 MCM10Q7L590 875 aa28.57■■■□□ 2.16
CIRBP-208ENST00000586548 CLUAP1Q96AJ1 413 aa28.57■■■□□ 2.16
CIRBP-208ENST00000586548 TNNQ9UQP3 1299 aa28.57■■■□□ 2.16
CIRBP-208ENST00000586548 MED1Q15648 1581 aaPredicted RBP28.56■■■□□ 2.16
CIRBP-208ENST00000586548 DZIP1LQ8IYY4 767 aaKnown RBP28.56■■■□□ 2.16
CIRBP-208ENST00000586548 LRRC37A3O60309 1634 aa28.56■■■□□ 2.16
CIRBP-208ENST00000586548 CHL1O00533 1208 aa28.55■■■□□ 2.16
CIRBP-208ENST00000586548 RTF1Q92541 710 aaKnown RBP28.55■■■□□ 2.16
CIRBP-208ENST00000586548 PXDNQ92626 1479 aa28.55■■■□□ 2.16
CIRBP-208ENST00000586548 IPO8O15397 1037 aaKnown RBP28.55■■■□□ 2.16
CIRBP-208ENST00000586548 ATF7IPQ6VMQ6 1270 aa28.55■■■□□ 2.16
CIRBP-208ENST00000586548 FTSJ3Q8IY81 847 aaKnown RBP28.55■■■□□ 2.16
CIRBP-208ENST00000586548 TNS3Q68CZ2 1445 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms