RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	HSP90AB2P	Q58FF8	381 aa		28.92	■■■□□ 2.22
CIRBP-208	ENST00000586548	NCOA3	Q9Y6Q9	1424 aa		28.92	■■■□□ 2.22
CIRBP-208	ENST00000586548	KIF1A	Q12756	1690 aa		28.92	■■■□□ 2.22
CIRBP-208	ENST00000586548	PAK3	O75914	559 aa	Predicted RBP	28.91	■■■□□ 2.22
CIRBP-208	ENST00000586548	BCAR3	O75815	825 aa		28.91	■■■□□ 2.22
CIRBP-208	ENST00000586548	CT47B1	P0C2W7	299 aa	Predicted RBP	28.91	■■■□□ 2.22
CIRBP-208	ENST00000586548	C19orf44	Q9H6X5	657 aa		28.91	■■■□□ 2.22
CIRBP-208	ENST00000586548	FANCI	Q9NVI1	1328 aa		28.9	■■■□□ 2.22
CIRBP-208	ENST00000586548	HSPA2	P54652	639 aa		28.9	■■■□□ 2.22
CIRBP-208	ENST00000586548	C20orf194	Q5TEA3	1177 aa		28.9	■■■□□ 2.22
CIRBP-208	ENST00000586548	TSHZ2	Q9NRE2	1034 aa		28.89	■■■□□ 2.22
CIRBP-208	ENST00000586548	ARHGEF10	O15013	1369 aa		28.89	■■■□□ 2.22
CIRBP-208	ENST00000586548	DLG5	Q8TDM6	1919 aa		28.89	■■■□□ 2.22
CIRBP-208	ENST00000586548	PSME1	Q06323	249 aa		28.89	■■■□□ 2.21
CIRBP-208	ENST00000586548	DCC	P43146	1447 aa		28.88	■■■□□ 2.21
CIRBP-208	ENST00000586548	AMPH	P49418	695 aa		28.88	■■■□□ 2.21
CIRBP-208	ENST00000586548	C1orf167	Q5SNV9	1468 aa		28.87	■■■□□ 2.21
CIRBP-208	ENST00000586548	RARS	P54136	660 aa	Known RBP	28.87	■■■□□ 2.21
CIRBP-208	ENST00000586548	CALD1	Q05682	793 aa	Known RBP	28.86	■■■□□ 2.21
CIRBP-208	ENST00000586548	LMOD3	Q0VAK6	560 aa		28.86	■■■□□ 2.21
CIRBP-208	ENST00000586548	NUTM2G	Q5VZR2	741 aa		28.86	■■■□□ 2.21
CIRBP-208	ENST00000586548	SULT6B1	Q6IMI4	303 aa		28.86	■■■□□ 2.21
CIRBP-208	ENST00000586548	TMEM94	Q12767	1356 aa		28.85	■■■□□ 2.21
CIRBP-208	ENST00000586548	ORAI2	Q96SN7	254 aa		28.85	■■■□□ 2.21
CIRBP-208	ENST00000586548	TSR2	Q969E8	191 aa	Known RBP	28.84	■■■□□ 2.21
CIRBP-208	ENST00000586548	RTL1	A6NKG5	1358 aa		28.84	■■■□□ 2.21
CIRBP-208	ENST00000586548	AEBP1	Q8IUX7	1158 aa		28.83	■■■□□ 2.21
CIRBP-208	ENST00000586548	NFAT5	O94916	1531 aa		28.83	■■■□□ 2.21
CIRBP-208	ENST00000586548	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.82	■■■□□ 2.2
CIRBP-208	ENST00000586548	LTN1	O94822	1766 aa		28.82	■■■□□ 2.2
CIRBP-208	ENST00000586548	STRC	Q7RTU9	1775 aa		28.81	■■■□□ 2.2
CIRBP-208	ENST00000586548	PDE3A	Q14432	1141 aa		28.81	■■■□□ 2.2
CIRBP-208	ENST00000586548	HOXC9	P31274	260 aa		28.8	■■■□□ 2.2
CIRBP-208	ENST00000586548	KDR	P35968	1356 aa		28.8	■■■□□ 2.2
CIRBP-208	ENST00000586548	EXOSC9	Q06265	439 aa	Known RBP	28.8	■■■□□ 2.2
CIRBP-208	ENST00000586548	MST1R	Q04912	1400 aa		28.79	■■■□□ 2.2
CIRBP-208	ENST00000586548	IGSF1	Q8N6C5	1336 aa		28.79	■■■□□ 2.2
CIRBP-208	ENST00000586548	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.78	■■■□□ 2.2
CIRBP-208	ENST00000586548	ATF3	P18847	181 aa		28.78	■■■□□ 2.2
CIRBP-208	ENST00000586548	FOXO3	O43524	673 aa		28.77	■■■□□ 2.2
CIRBP-208	ENST00000586548	CANX	P27824	592 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-208	ENST00000586548	KCNH5	Q8NCM2	988 aa		28.77	■■■□□ 2.2
CIRBP-208	ENST00000586548	IFT57	Q9NWB7	429 aa		28.77	■■■□□ 2.2
CIRBP-208	ENST00000586548	SLIT3	O75094	1523 aa		28.77	■■■□□ 2.2
CIRBP-208	ENST00000586548	GNAI1	P63096	354 aa		28.76	■■■□□ 2.19
CIRBP-208	ENST00000586548	EYA1	Q99502	592 aa		28.74	■■■□□ 2.19
CIRBP-208	ENST00000586548	ZNF853	P0CG23	659 aa		28.72	■■■□□ 2.19
CIRBP-208	ENST00000586548	KRT28	Q7Z3Y7	464 aa		28.72	■■■□□ 2.19
CIRBP-208	ENST00000586548	XIRP1	Q702N8	1843 aa	Known RBP	28.72	■■■□□ 2.19
CIRBP-208	ENST00000586548	CADPS2	Q86UW7	1296 aa		28.72	■■■□□ 2.19
CIRBP-208	ENST00000586548	THUMPD2	Q9BTF0	503 aa	Known RBP	28.72	■■■□□ 2.19
CIRBP-208	ENST00000586548	FRAT1	Q92837	279 aa	Predicted RBP	28.71	■■■□□ 2.19
CIRBP-208	ENST00000586548	MSH6	P52701	1360 aa		28.7	■■■□□ 2.19
CIRBP-208	ENST00000586548	IP6K1	Q92551	441 aa		28.7	■■■□□ 2.19
CIRBP-208	ENST00000586548	ALS2	Q96Q42	1657 aa		28.7	■■■□□ 2.18
CIRBP-208	ENST00000586548	XPC	Q01831	940 aa	Predicted RBP	28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	CFAP44	Q96MT7	982 aa		28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	BCL2L13	Q9BXK5	485 aa		28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	USP19	O94966	1318 aa		28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	ZNF428	Q96B54	188 aa		28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	LAS1L	Q9Y4W2	734 aa	Known RBP	28.69	■■■□□ 2.18
CIRBP-208	ENST00000586548	SMC4	Q9NTJ3	1288 aa		28.67	■■■□□ 2.18
CIRBP-208	ENST00000586548	FAM83G	A6ND36	823 aa		28.66	■■■□□ 2.18
CIRBP-208	ENST00000586548	ALDH1L2	Q3SY69	923 aa		28.66	■■■□□ 2.18
CIRBP-208	ENST00000586548	PANK1	Q8TE04	598 aa		28.66	■■■□□ 2.18
CIRBP-208	ENST00000586548	SSH1	Q8WYL5	1049 aa		28.65	■■■□□ 2.18
CIRBP-208	ENST00000586548	MBIP	Q9NS73	344 aa		28.65	■■■□□ 2.18
CIRBP-208	ENST00000586548	GC	P02774	474 aa		28.64	■■■□□ 2.18
CIRBP-208	ENST00000586548	ZKSCAN2	Q63HK3	967 aa		28.64	■■■□□ 2.18
CIRBP-208	ENST00000586548	MS4A1	P11836	297 aa		28.63	■■■□□ 2.17
CIRBP-208	ENST00000586548	GAS2L2	Q8NHY3	880 aa		28.63	■■■□□ 2.17
CIRBP-208	ENST00000586548	AAMP	Q13685	434 aa		28.63	■■■□□ 2.17
CIRBP-208	ENST00000586548	DCTN1	Q14203	1278 aa		28.63	■■■□□ 2.17
CIRBP-208	ENST00000586548	MTHFSD	Q2M296	383 aa	Known RBP	28.62	■■■□□ 2.17
CIRBP-208	ENST00000586548	KDM2B	Q8NHM5	1336 aa		28.61	■■■□□ 2.17
CIRBP-208	ENST00000586548	ARHGEF25	Q86VW2	580 aa		28.61	■■■□□ 2.17
CIRBP-208	ENST00000586548	COG6	Q9Y2V7	657 aa		28.61	■■■□□ 2.17
CIRBP-208	ENST00000586548	KIF16B	Q96L93	1317 aa		28.61	■■■□□ 2.17
CIRBP-208	ENST00000586548	LMOD2	Q6P5Q4	547 aa		28.6	■■■□□ 2.17
CIRBP-208	ENST00000586548	LTV1	Q96GA3	475 aa	Predicted RBP	28.6	■■■□□ 2.17
CIRBP-208	ENST00000586548	NPHP3	Q7Z494	1330 aa		28.6	■■■□□ 2.17
CIRBP-208	ENST00000586548	BRPF1	P55201	1214 aa	Predicted RBP	28.59	■■■□□ 2.17
CIRBP-208	ENST00000586548	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.59	■■■□□ 2.17
CIRBP-208	ENST00000586548	RLBP1	P12271	317 aa		28.58	■■■□□ 2.17
CIRBP-208	ENST00000586548	VAMP4	O75379	141 aa		28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	CRB1	P82279	1406 aa		28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	HTATSF1	O43719	755 aa	Known RBP	28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	MCM10	Q7L590	875 aa		28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	CLUAP1	Q96AJ1	413 aa		28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	TNN	Q9UQP3	1299 aa		28.57	■■■□□ 2.16
CIRBP-208	ENST00000586548	MED1	Q15648	1581 aa	Predicted RBP	28.56	■■■□□ 2.16
CIRBP-208	ENST00000586548	DZIP1L	Q8IYY4	767 aa	Known RBP	28.56	■■■□□ 2.16
CIRBP-208	ENST00000586548	LRRC37A3	O60309	1634 aa		28.56	■■■□□ 2.16
CIRBP-208	ENST00000586548	CHL1	O00533	1208 aa		28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	RTF1	Q92541	710 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	PXDN	Q92626	1479 aa		28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	IPO8	O15397	1037 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	ATF7IP	Q6VMQ6	1270 aa		28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	FTSJ3	Q8IY81	847 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-208	ENST00000586548	TNS3	Q68CZ2	1445 aa		28.54	■■■□□ 2.16

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