RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 ATP7BP35670 1465 aa11.31□□□□□ -0.6
SMAD4-204ENST00000586253 RGPD8O14715 1765 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-204ENST00000586253 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
SMAD4-204ENST00000586253 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
SMAD4-204ENST00000586253 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
SMAD4-204ENST00000586253 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-204ENST00000586253 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
SMAD4-204ENST00000586253 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
SMAD4-204ENST00000586253 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
SMAD4-204ENST00000586253 TOPAZ1Q8N9V7 1692 aa11.29□□□□□ -0.6
SMAD4-204ENST00000586253 NPHP3Q7Z494 1330 aa11.29□□□□□ -0.6
SMAD4-204ENST00000586253 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
SMAD4-204ENST00000586253 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-204ENST00000586253 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
SMAD4-204ENST00000586253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-204ENST00000586253 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
SMAD4-204ENST00000586253 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
SMAD4-204ENST00000586253 NUDT16Q96DE0 195 aaKnown RBP11.27□□□□□ -0.61
SMAD4-204ENST00000586253 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-204ENST00000586253 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
SMAD4-204ENST00000586253 TESK2Q96S53 571 aa11.27□□□□□ -0.61
SMAD4-204ENST00000586253 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
SMAD4-204ENST00000586253 PXDNQ92626 1479 aa11.26□□□□□ -0.61
SMAD4-204ENST00000586253 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-204ENST00000586253 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
SMAD4-204ENST00000586253 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
SMAD4-204ENST00000586253 FOXO3O43524 673 aa11.25□□□□□ -0.61
SMAD4-204ENST00000586253 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
SMAD4-204ENST00000586253 POLR3AO14802 1390 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-204ENST00000586253 JCADQ9P266 1359 aa11.25□□□□□ -0.61
SMAD4-204ENST00000586253 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
SMAD4-204ENST00000586253 SOX12O15370 315 aa11.24□□□□□ -0.61
SMAD4-204ENST00000586253 EIF4G2P78344 907 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMAD4-204ENST00000586253 LRRC59Q96AG4 307 aaKnown RBP11.24□□□□□ -0.61
SMAD4-204ENST00000586253 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
SMAD4-204ENST00000586253 TMF1P82094 1093 aa11.23□□□□□ -0.61
SMAD4-204ENST00000586253 PSME1Q06323 249 aa11.23□□□□□ -0.61
SMAD4-204ENST00000586253 PMFBP1Q8TBY8 1022 aa11.23□□□□□ -0.61
SMAD4-204ENST00000586253 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
SMAD4-204ENST00000586253 SBNO1A3KN83 1393 aa11.23□□□□□ -0.61
SMAD4-204ENST00000586253 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
SMAD4-204ENST00000586253 NGDNQ8NEJ9 315 aaKnown RBP11.22□□□□□ -0.61
SMAD4-204ENST00000586253 NINLQ9Y2I6 1382 aa11.22□□□□□ -0.61
SMAD4-204ENST00000586253 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-204ENST00000586253 COL22A1Q8NFW1 1626 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-204ENST00000586253 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-204ENST00000586253 SPATA31A6Q5VVP1 1343 aa11.21□□□□□ -0.61
SMAD4-204ENST00000586253 G3V3G9 751 aa11.21□□□□□ -0.61
SMAD4-204ENST00000586253 KRT28Q7Z3Y7 464 aa11.21□□□□□ -0.61
SMAD4-204ENST00000586253 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 PNPLA6Q8IY17 1366 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 ACEP12821 1306 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
SMAD4-204ENST00000586253 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-204ENST00000586253 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
SMAD4-204ENST00000586253 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
SMAD4-204ENST00000586253 AKAP12Q02952 1782 aa11.19□□□□□ -0.62
SMAD4-204ENST00000586253 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
SMAD4-204ENST00000586253 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
SMAD4-204ENST00000586253 ALS2Q96Q42 1657 aa11.18□□□□□ -0.62
SMAD4-204ENST00000586253 ZEB1P37275 1124 aaPredicted RBP11.18□□□□□ -0.62
SMAD4-204ENST00000586253 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
SMAD4-204ENST00000586253 USP6P35125 1406 aa11.18□□□□□ -0.62
SMAD4-204ENST00000586253 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
SMAD4-204ENST00000586253 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
SMAD4-204ENST00000586253 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-204ENST00000586253 MON2Q7Z3U7 1717 aa11.16□□□□□ -0.62
SMAD4-204ENST00000586253 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
SMAD4-204ENST00000586253 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
SMAD4-204ENST00000586253 TMC1Q8TDI8 760 aa11.15□□□□□ -0.62
SMAD4-204ENST00000586253 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
SMAD4-204ENST00000586253 MYOM1P52179 1685 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 LRP6O75581 1613 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
SMAD4-204ENST00000586253 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
SMAD4-204ENST00000586253 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
SMAD4-204ENST00000586253 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
SMAD4-204ENST00000586253 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
SMAD4-204ENST00000586253 EDC4Q6P2E9 1401 aaKnown RBP11.13□□□□□ -0.63
SMAD4-204ENST00000586253 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
SMAD4-204ENST00000586253 CRYBG1Q9Y4K1 1723 aa11.12□□□□□ -0.63
SMAD4-204ENST00000586253 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
SMAD4-204ENST00000586253 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
SMAD4-204ENST00000586253 TTC21BQ7Z4L5 1316 aa11.11□□□□□ -0.63
SMAD4-204ENST00000586253 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
SMAD4-204ENST00000586253 ABTB2Q8N961 1025 aa11.11□□□□□ -0.63
SMAD4-204ENST00000586253 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
SMAD4-204ENST00000586253 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
SMAD4-204ENST00000586253 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-204ENST00000586253 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-204ENST00000586253 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-204ENST00000586253 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
SMAD4-204ENST00000586253 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-204ENST00000586253 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
SMAD4-204ENST00000586253 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms