RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
ITGB4-212ENST00000584558 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
ITGB4-212ENST00000584558 PRDM4Q9UKN5 801 aa16.04■□□□□ 0.16
ITGB4-212ENST00000584558 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
ITGB4-212ENST00000584558 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-212ENST00000584558 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-212ENST00000584558 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
ITGB4-212ENST00000584558 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.15
ITGB4-212ENST00000584558 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
ITGB4-212ENST00000584558 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
ITGB4-212ENST00000584558 BCAR3O75815 825 aa16.01■□□□□ 0.15
ITGB4-212ENST00000584558 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
ITGB4-212ENST00000584558 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
ITGB4-212ENST00000584558 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
ITGB4-212ENST00000584558 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
ITGB4-212ENST00000584558 WWC1Q8IX03 1113 aa16■□□□□ 0.15
ITGB4-212ENST00000584558 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
ITGB4-212ENST00000584558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITGB4-212ENST00000584558 TCP11L2Q8N4U5 519 aa15.99■□□□□ 0.15
ITGB4-212ENST00000584558 ARID3AQ99856 593 aa15.99■□□□□ 0.15
ITGB4-212ENST00000584558 E9PSI1 815 aa15.98■□□□□ 0.15
ITGB4-212ENST00000584558 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
ITGB4-212ENST00000584558 PIK3R4Q99570 1358 aa15.98■□□□□ 0.15
ITGB4-212ENST00000584558 AAMPQ13685 434 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 NME9Q86XW9 330 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
ITGB4-212ENST00000584558 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
ITGB4-212ENST00000584558 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
ITGB4-212ENST00000584558 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.14
ITGB4-212ENST00000584558 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.14
ITGB4-212ENST00000584558 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.14
ITGB4-212ENST00000584558 CHD2O14647 1828 aaKnown RBP15.96■□□□□ 0.14
ITGB4-212ENST00000584558 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
ITGB4-212ENST00000584558 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
ITGB4-212ENST00000584558 SSH2Q76I76 1423 aa15.95■□□□□ 0.14
ITGB4-212ENST00000584558 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
ITGB4-212ENST00000584558 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
ITGB4-212ENST00000584558 ISY1Q9ULR0 285 aaKnown RBP15.95■□□□□ 0.14
ITGB4-212ENST00000584558 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-212ENST00000584558 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-212ENST00000584558 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
ITGB4-212ENST00000584558 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
ITGB4-212ENST00000584558 USP6P35125 1406 aa15.94■□□□□ 0.14
ITGB4-212ENST00000584558 FBLN1P23142 703 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
ITGB4-212ENST00000584558 RIPK4P57078 832 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 PANK1Q8TE04 598 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 ACEP12821 1306 aa15.93■□□□□ 0.14
ITGB4-212ENST00000584558 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
ITGB4-212ENST00000584558 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
ITGB4-212ENST00000584558 OVOS2A0A0J9YW53 1432 aa15.92■□□□□ 0.14
ITGB4-212ENST00000584558 OVOS2Q6IE36 1432 aa15.92■□□□□ 0.14
ITGB4-212ENST00000584558 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
ITGB4-212ENST00000584558 TTC21BQ7Z4L5 1316 aa15.91■□□□□ 0.14
ITGB4-212ENST00000584558 KCNA6P17658 529 aa15.9■□□□□ 0.14
ITGB4-212ENST00000584558 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
ITGB4-212ENST00000584558 R3HCC1Q9Y3T6 440 aaKnown RBP15.9■□□□□ 0.14
ITGB4-212ENST00000584558 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
ITGB4-212ENST00000584558 OFD1O75665 1012 aa15.9■□□□□ 0.14
ITGB4-212ENST00000584558 NEUROD2Q15784 382 aa15.9■□□□□ 0.14
ITGB4-212ENST00000584558 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-212ENST00000584558 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
ITGB4-212ENST00000584558 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
ITGB4-212ENST00000584558 COG3Q96JB2 828 aa15.89■□□□□ 0.13
ITGB4-212ENST00000584558 EMILIN1Q9Y6C2 1016 aa15.89■□□□□ 0.13
ITGB4-212ENST00000584558 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-212ENST00000584558 C22orf23Q9BZE7 217 aa15.89■□□□□ 0.13
ITGB4-212ENST00000584558 HSCBQ8IWL3 235 aa15.89■□□□□ 0.13
ITGB4-212ENST00000584558 ZHX1Q9UKY1 873 aaPredicted RBP15.88■□□□□ 0.13
ITGB4-212ENST00000584558 IL13P35225 146 aa15.88■□□□□ 0.13
ITGB4-212ENST00000584558 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
ITGB4-212ENST00000584558 CCDC173Q0VFZ6 552 aa15.88■□□□□ 0.13
ITGB4-212ENST00000584558 PRDM10Q9NQV6 1147 aa15.88■□□□□ 0.13
ITGB4-212ENST00000584558 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
ITGB4-212ENST00000584558 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
ITGB4-212ENST00000584558 FGD1P98174 961 aa15.87■□□□□ 0.13
ITGB4-212ENST00000584558 ANP32BQ92688 251 aaKnown RBP15.87■□□□□ 0.13
ITGB4-212ENST00000584558 MAP7D2Q96T17 732 aa15.87■□□□□ 0.13
ITGB4-212ENST00000584558 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
ITGB4-212ENST00000584558 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
ITGB4-212ENST00000584558 FCHSD2O94868 740 aa15.87■□□□□ 0.13
ITGB4-212ENST00000584558 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
ITGB4-212ENST00000584558 NASPP49321 788 aaPredicted RBP15.86■□□□□ 0.13
ITGB4-212ENST00000584558 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
ITGB4-212ENST00000584558 MARF1Q9Y4F3 1742 aaKnown RBP15.86■□□□□ 0.13
ITGB4-212ENST00000584558 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
ITGB4-212ENST00000584558 TNPO1Q92973 898 aaKnown RBP15.85■□□□□ 0.13
ITGB4-212ENST00000584558 PMFBP1Q8TBY8 1022 aa15.84■□□□□ 0.13
ITGB4-212ENST00000584558 UQCRHLA0A096LP55 91 aa15.84■□□□□ 0.13
ITGB4-212ENST00000584558 UQCRHP07919 91 aa15.84■□□□□ 0.13
ITGB4-212ENST00000584558 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
ITGB4-212ENST00000584558 TTC21AQ8NDW8 1320 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms