RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 ANKRD45Q5TZF3 282 aa10.8□□□□□ -0.68
BDNF-219ENST00000584049 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
BDNF-219ENST00000584049 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
BDNF-219ENST00000584049 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
BDNF-219ENST00000584049 RABEP1Q15276 862 aa10.79□□□□□ -0.68
BDNF-219ENST00000584049 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
BDNF-219ENST00000584049 VAMP4O75379 141 aa10.79□□□□□ -0.68
BDNF-219ENST00000584049 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
BDNF-219ENST00000584049 CD2BP2O95400 341 aaKnown RBP10.78□□□□□ -0.68
BDNF-219ENST00000584049 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
BDNF-219ENST00000584049 GNAI1P63096 354 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 NUCB2P80303 420 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 GGT6Q6P531 493 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 ZNF445P59923 1031 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 HS1BP3Q53T59 392 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 SLC52A1Q9NWF4 448 aa10.78□□□□□ -0.68
BDNF-219ENST00000584049 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.68
BDNF-219ENST00000584049 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.68
BDNF-219ENST00000584049 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.68
BDNF-219ENST00000584049 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.68
BDNF-219ENST00000584049 ARHGEF40Q8TER5 1519 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 SSFA2P28290 1259 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 TERF1P54274 439 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 ATP7BP35670 1465 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 YTHDC2Q9H6S0 1430 aaKnown RBP10.77□□□□□ -0.69
BDNF-219ENST00000584049 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
BDNF-219ENST00000584049 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
BDNF-219ENST00000584049 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
BDNF-219ENST00000584049 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
BDNF-219ENST00000584049 DDX49Q9Y6V7 483 aaKnown RBP10.76□□□□□ -0.69
BDNF-219ENST00000584049 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
BDNF-219ENST00000584049 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
BDNF-219ENST00000584049 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
BDNF-219ENST00000584049 CDK12Q9NYV4 1490 aaPredicted RBP10.75□□□□□ -0.69
BDNF-219ENST00000584049 DLC1Q96QB1 1528 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 NEO1Q92859 1461 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 OFD1O75665 1012 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
BDNF-219ENST00000584049 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.74□□□□□ -0.69
BDNF-219ENST00000584049 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
BDNF-219ENST00000584049 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 KNDC1Q76NI1 1749 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
BDNF-219ENST00000584049 GSPT1P15170 499 aaKnown RBP10.74□□□□□ -0.69
BDNF-219ENST00000584049 TTC22Q5TAA0 569 aa10.74□□□□□ -0.69
BDNF-219ENST00000584049 IDI1Q13907 227 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
BDNF-219ENST00000584049 INTS3Q68E01 1043 aaKnown RBP10.73□□□□□ -0.69
BDNF-219ENST00000584049 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
BDNF-219ENST00000584049 TWISTNBQ3B726 338 aaPredicted RBP10.72□□□□□ -0.69
BDNF-219ENST00000584049 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 STK26Q9P289 416 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 ALKQ9UM73 1620 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
BDNF-219ENST00000584049 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
BDNF-219ENST00000584049 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
BDNF-219ENST00000584049 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
BDNF-219ENST00000584049 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 TSPYL6Q8N831 410 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 PDLIM2Q96JY6 352 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
BDNF-219ENST00000584049 CDK19Q9BWU1 502 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 PDCL3Q9H2J4 239 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 DLG5Q8TDM6 1919 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 CASC1Q6TDU7 716 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
BDNF-219ENST00000584049 ATP10DQ9P241 1426 aa10.71□□□□□ -0.7
BDNF-219ENST00000584049 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.7
BDNF-219ENST00000584049 PHACTR3Q96KR7 559 aa10.71□□□□□ -0.7
BDNF-219ENST00000584049 ST18O60284 1047 aa10.7□□□□□ -0.7
BDNF-219ENST00000584049 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
BDNF-219ENST00000584049 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
BDNF-219ENST00000584049 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
BDNF-219ENST00000584049 IL13P35225 146 aa10.7□□□□□ -0.7
BDNF-219ENST00000584049 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
BDNF-219ENST00000584049 ZNF500O60304 480 aaPredicted RBP10.7□□□□□ -0.7
BDNF-219ENST00000584049 MCM5P33992 734 aa10.7□□□□□ -0.7
BDNF-219ENST00000584049 MCTP1Q6DN14 999 aa10.69□□□□□ -0.7
BDNF-219ENST00000584049 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
BDNF-219ENST00000584049 REC8O95072 547 aa10.69□□□□□ -0.7
BDNF-219ENST00000584049 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
BDNF-219ENST00000584049 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
BDNF-219ENST00000584049 AK9Q5TCS8 1911 aa10.68□□□□□ -0.7
BDNF-219ENST00000584049 RGS12O14924 1447 aa10.68□□□□□ -0.7
BDNF-219ENST00000584049 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
BDNF-219ENST00000584049 MAP7D2Q96T17 732 aa10.68□□□□□ -0.7
BDNF-219ENST00000584049 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
BDNF-219ENST00000584049 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
BDNF-219ENST00000584049 HMOX1P09601 288 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms