RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
VAPA-207ENST00000583879 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
VAPA-207ENST00000583879 SF3B2Q13435 895 aaKnown RBP7.99□□□□□ -1.13
VAPA-207ENST00000583879 DEFB132Q7Z7B7 95 aa7.99□□□□□ -1.13
VAPA-207ENST00000583879 SEPT12Q8IYM1 358 aa7.99□□□□□ -1.13
VAPA-207ENST00000583879 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
VAPA-207ENST00000583879 PXDNQ92626 1479 aa7.99□□□□□ -1.13
VAPA-207ENST00000583879 BLMP54132 1417 aaPredicted RBP7.98□□□□□ -1.13
VAPA-207ENST00000583879 RRBP1Q9P2E9 1410 aaKnown RBP7.98□□□□□ -1.13
VAPA-207ENST00000583879 PSME1Q06323 249 aa7.98□□□□□ -1.13
VAPA-207ENST00000583879 VPS72Q15906 364 aa7.98□□□□□ -1.13
VAPA-207ENST00000583879 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
VAPA-207ENST00000583879 COL22A1Q8NFW1 1626 aaPredicted RBP7.98□□□□□ -1.13
VAPA-207ENST00000583879 SLIT2O94813 1529 aa7.98□□□□□ -1.13
VAPA-207ENST00000583879 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
VAPA-207ENST00000583879 NLRP6P59044 892 aa7.97□□□□□ -1.13
VAPA-207ENST00000583879 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
VAPA-207ENST00000583879 ANKRD30BQ9BXX2 1392 aa7.97□□□□□ -1.13
VAPA-207ENST00000583879 PLEKHH1Q9ULM0 1364 aa7.97□□□□□ -1.13
VAPA-207ENST00000583879 TECPR2O15040 1411 aa7.96□□□□□ -1.13
VAPA-207ENST00000583879 RALGAPBQ86X10 1494 aa7.96□□□□□ -1.13
VAPA-207ENST00000583879 FAM83GA6ND36 823 aa7.96□□□□□ -1.14
VAPA-207ENST00000583879 KRT27Q7Z3Y8 459 aa7.96□□□□□ -1.14
VAPA-207ENST00000583879 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.14
VAPA-207ENST00000583879 C14orf93Q9H972 538 aaKnown RBP7.96□□□□□ -1.14
VAPA-207ENST00000583879 TAOK2Q9UL54 1235 aa7.96□□□□□ -1.14
VAPA-207ENST00000583879 CCDC9Q9Y3X0 531 aaKnown RBP7.96□□□□□ -1.14
VAPA-207ENST00000583879 KIF1BO60333 1816 aa7.95□□□□□ -1.14
VAPA-207ENST00000583879 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
VAPA-207ENST00000583879 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
VAPA-207ENST00000583879 CDC42BPGQ6DT37 1551 aa7.95□□□□□ -1.14
VAPA-207ENST00000583879 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
VAPA-207ENST00000583879 EP400Q96L91 3159 aa7.94□□□□□ -1.14
VAPA-207ENST00000583879 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
VAPA-207ENST00000583879 SBNO1A3KN83 1393 aa7.94□□□□□ -1.14
VAPA-207ENST00000583879 SPATA31E1Q6ZUB1 1445 aa7.94□□□□□ -1.14
VAPA-207ENST00000583879 YTHDC2Q9H6S0 1430 aaKnown RBP7.94□□□□□ -1.14
VAPA-207ENST00000583879 BAG6P46379 1132 aa7.93□□□□□ -1.14
VAPA-207ENST00000583879 PMFBP1Q8TBY8 1022 aa7.93□□□□□ -1.14
VAPA-207ENST00000583879 KHSRPQ92945 711 aaKnown RBP eCLIP7.93□□□□□ -1.142e-7■■□□□ 12.2
VAPA-207ENST00000583879 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
VAPA-207ENST00000583879 DHX57Q6P158 1386 aaKnown RBP7.93□□□□□ -1.14
VAPA-207ENST00000583879 GLI3P10071 1580 aa7.93□□□□□ -1.14
VAPA-207ENST00000583879 A0A0G2JS52 829 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 PSDA5PKW4 1024 aaPredicted RBP7.92□□□□□ -1.14
VAPA-207ENST00000583879 HRCP23327 699 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
VAPA-207ENST00000583879 MYT1Q01538 1121 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 SAFB2Q14151 953 aaKnown RBP eCLIP7.92□□□□□ -1.14
VAPA-207ENST00000583879 FAM98CQ17RN3 349 aaKnown RBP7.92□□□□□ -1.14
VAPA-207ENST00000583879 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
VAPA-207ENST00000583879 ARHGEF10O15013 1369 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 PIK3C2GO75747 1445 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 TNS3Q68CZ2 1445 aa7.92□□□□□ -1.14
VAPA-207ENST00000583879 FBXO22Q8NEZ5 403 aa7.91□□□□□ -1.14
VAPA-207ENST00000583879 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
VAPA-207ENST00000583879 POGKQ9P215 609 aa7.91□□□□□ -1.14
VAPA-207ENST00000583879 PPLO60437 1756 aa7.91□□□□□ -1.14
VAPA-207ENST00000583879 EN1Q05925 392 aaPredicted RBP7.9□□□□□ -1.14
VAPA-207ENST00000583879 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
VAPA-207ENST00000583879 NRXN1Q9ULB1 1477 aa7.89□□□□□ -1.15
VAPA-207ENST00000583879 ACIN1Q9UKV3 1341 aaKnown RBP7.89□□□□□ -1.15
VAPA-207ENST00000583879 FAM182BQ5T319 152 aa7.89□□□□□ -1.15
VAPA-207ENST00000583879 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.89□□□□□ -1.15
VAPA-207ENST00000583879 MARF1Q9Y4F3 1742 aaKnown RBP7.89□□□□□ -1.15
VAPA-207ENST00000583879 USP32Q8NFA0 1604 aa7.89□□□□□ -1.15
VAPA-207ENST00000583879 GPRASP1Q5JY77 1395 aa7.88□□□□□ -1.15
VAPA-207ENST00000583879 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
VAPA-207ENST00000583879 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
VAPA-207ENST00000583879 PBX2P40425 430 aa7.88□□□□□ -1.15
VAPA-207ENST00000583879 R3HDM1Q15032 1099 aaKnown RBP7.88□□□□□ -1.15
VAPA-207ENST00000583879 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
VAPA-207ENST00000583879 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
VAPA-207ENST00000583879 ANKARQ7Z5J8 1434 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 FMN2Q9NZ56 1722 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 KIF1AQ12756 1690 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 C2orf72A6NCS6 295 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 WASLO00401 505 aaPredicted RBP7.87□□□□□ -1.15
VAPA-207ENST00000583879 NUDT7P0C024 238 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 NGDNQ8NEJ9 315 aaKnown RBP7.87□□□□□ -1.15
VAPA-207ENST00000583879 MFRPQ9BY79 579 aa7.87□□□□□ -1.15
VAPA-207ENST00000583879 PRR36Q9H6K5 1346 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 STK25O00506 426 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 KIF3CO14782 793 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
VAPA-207ENST00000583879 FAM196AQ6ZSG2 479 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 CAMKK2Q96RR4 588 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 PRDM11Q9NQV5 511 aa7.86□□□□□ -1.15
VAPA-207ENST00000583879 SPATA31A1Q5TZJ5 1347 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 MINK1Q8N4C8 1332 aaPredicted RBP7.85□□□□□ -1.15
VAPA-207ENST00000583879 TRIM37O94972 964 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 APBA3O96018 575 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 KDM2AQ9Y2K7 1162 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 KNDC1Q76NI1 1749 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 BRWD3Q6RI45 1802 aa7.85□□□□□ -1.15
VAPA-207ENST00000583879 SLC34A2O95436 690 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 EVA1CP58658 441 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 CHRNA2Q15822 529 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 STAC3Q96MF2 364 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms