RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-214ENST00000582981 C8orf58Q8NAV2 365 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
TOP3A-214ENST00000582981 KIDINS220Q9ULH0 1771 aa13□□□□□ -0.33
TOP3A-214ENST00000582981 HDGFL2Q7Z4V5 671 aaPredicted RBP13□□□□□ -0.33
TOP3A-214ENST00000582981 KIF16BQ96L93 1317 aa13□□□□□ -0.33
TOP3A-214ENST00000582981 GBP4Q96PP9 640 aa13□□□□□ -0.33
TOP3A-214ENST00000582981 POLKQ9UBT6 870 aa13□□□□□ -0.33
TOP3A-214ENST00000582981 KIF2CQ99661 725 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 NRXN1Q9ULB1 1477 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 GLI2P10070 1586 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 PKP1Q13835 747 aa12.99□□□□□ -0.33
TOP3A-214ENST00000582981 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
TOP3A-214ENST00000582981 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 MIS18AQ9NYP9 233 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-214ENST00000582981 VAMP4O75379 141 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-214ENST00000582981 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-214ENST00000582981 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
TOP3A-214ENST00000582981 AK9Q5TCS8 1911 aa12.97□□□□□ -0.33
TOP3A-214ENST00000582981 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-214ENST00000582981 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
TOP3A-214ENST00000582981 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
TOP3A-214ENST00000582981 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
TOP3A-214ENST00000582981 CAMSAP1Q5T5Y3 1602 aa12.96□□□□□ -0.33
TOP3A-214ENST00000582981 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
TOP3A-214ENST00000582981 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
TOP3A-214ENST00000582981 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.34
TOP3A-214ENST00000582981 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
TOP3A-214ENST00000582981 DTNBO60941 627 aa12.95□□□□□ -0.34
TOP3A-214ENST00000582981 CBX1P83916 185 aa12.95□□□□□ -0.34
TOP3A-214ENST00000582981 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
TOP3A-214ENST00000582981 SKOR2Q2VWA4 1001 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-214ENST00000582981 DNTTIP2Q5QJE6 756 aaKnown RBP12.94□□□□□ -0.34
TOP3A-214ENST00000582981 MCM10Q7L590 875 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 TXNDC2Q86VQ3 553 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
TOP3A-214ENST00000582981 MCTP1Q6DN14 999 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 K7ELQ4 463 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-214ENST00000582981 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 BMP2KLQ5H9B9 411 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-214ENST00000582981 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
TOP3A-214ENST00000582981 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 GOLGA6L22H0YM25 854 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 SLC4A10Q6U841 1118 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 TSC1Q92574 1164 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 PPLO60437 1756 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-214ENST00000582981 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
TOP3A-214ENST00000582981 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
TOP3A-214ENST00000582981 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
TOP3A-214ENST00000582981 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-214ENST00000582981 FCHSD2O94868 740 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 DMTNQ08495 405 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-214ENST00000582981 MPNDQ8N594 471 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
TOP3A-214ENST00000582981 NSD2O96028 1365 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 F6X3S4 739 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 DYNC1I1O14576 645 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 TERF1P54274 439 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
TOP3A-214ENST00000582981 YEATS2Q9ULM3 1422 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 CAVIN1Q6NZI2 390 aaKnown RBP12.91□□□□□ -0.34
TOP3A-214ENST00000582981 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-214ENST00000582981 ABCC3O15438 1527 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
TOP3A-214ENST00000582981 ZC3H13Q5T200 1668 aaKnown RBP12.91□□□□□ -0.34
TOP3A-214ENST00000582981 IGSF3O75054 1194 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 DDIT3P35638 169 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
TOP3A-214ENST00000582981 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-214ENST00000582981 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
TOP3A-214ENST00000582981 ZSCAN20P17040 1043 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-214ENST00000582981 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 MEIS3Q99687 375 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
TOP3A-214ENST00000582981 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
TOP3A-214ENST00000582981 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
TOP3A-214ENST00000582981 CDC45O75419 566 aa12.89□□□□□ -0.35
TOP3A-214ENST00000582981 IL16Q14005 1332 aa12.89□□□□□ -0.35
TOP3A-214ENST00000582981 GNAI1P63096 354 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms