RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ATF3P18847 181 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 MYH16Q9H6N6 1097 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 C1orf167Q5SNV9 1468 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
GGA3-213ENST00000582486 FLT4P35916 1363 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 NFE2L2Q16236 605 aa14.58□□□□□ -0.08
GGA3-213ENST00000582486 BCAR3O75815 825 aa14.57□□□□□ -0.08
GGA3-213ENST00000582486 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
GGA3-213ENST00000582486 USP54Q70EL1 1684 aa14.56□□□□□ -0.08
GGA3-213ENST00000582486 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
GGA3-213ENST00000582486 NCOA3Q9Y6Q9 1424 aa14.56□□□□□ -0.08
GGA3-213ENST00000582486 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
GGA3-213ENST00000582486 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
GGA3-213ENST00000582486 IL16Q14005 1332 aa14.55□□□□□ -0.08
GGA3-213ENST00000582486 HOXC9P31274 260 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 KRT28Q7Z3Y7 464 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 CCDC136Q96JN2 1154 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 MST1RQ04912 1400 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
GGA3-213ENST00000582486 DCCP43146 1447 aa14.53□□□□□ -0.08
GGA3-213ENST00000582486 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
GGA3-213ENST00000582486 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
GGA3-213ENST00000582486 CADPS2Q86UW7 1296 aa14.53□□□□□ -0.08
GGA3-213ENST00000582486 EYA1Q99502 592 aa14.53□□□□□ -0.08
GGA3-213ENST00000582486 RGPD1P0DJD0 1748 aa14.52□□□□□ -0.08
GGA3-213ENST00000582486 RARSP54136 660 aaKnown RBP14.52□□□□□ -0.08
GGA3-213ENST00000582486 THUMPD2Q9BTF0 503 aaKnown RBP14.52□□□□□ -0.08
GGA3-213ENST00000582486 ARHGEF10O15013 1369 aa14.52□□□□□ -0.09
GGA3-213ENST00000582486 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
GGA3-213ENST00000582486 MSH6P52701 1360 aa14.51□□□□□ -0.09
GGA3-213ENST00000582486 ZNF335Q9H4Z2 1342 aaPredicted RBP14.51□□□□□ -0.09
GGA3-213ENST00000582486 EXOSC9Q06265 439 aaKnown RBP14.51□□□□□ -0.09
GGA3-213ENST00000582486 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
GGA3-213ENST00000582486 KIF1AQ12756 1690 aa14.51□□□□□ -0.09
GGA3-213ENST00000582486 DDX17Q92841 729 aaKnown RBP14.5□□□□□ -0.09
GGA3-213ENST00000582486 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
GGA3-213ENST00000582486 FAM83GA6ND36 823 aa14.5□□□□□ -0.09
GGA3-213ENST00000582486 LTV1Q96GA3 475 aaPredicted RBP14.5□□□□□ -0.09
GGA3-213ENST00000582486 LAS1LQ9Y4W2 734 aaKnown RBP14.5□□□□□ -0.09
GGA3-213ENST00000582486 NFAT5O94916 1531 aa14.5□□□□□ -0.09
GGA3-213ENST00000582486 GCP02774 474 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 ZBTB7CA1YPR0 619 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 IP6K1Q92551 441 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 KDRP35968 1356 aa14.49□□□□□ -0.09
GGA3-213ENST00000582486 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
GGA3-213ENST00000582486 CALD1Q05682 793 aaKnown RBP14.48□□□□□ -0.09
GGA3-213ENST00000582486 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
GGA3-213ENST00000582486 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
GGA3-213ENST00000582486 LTN1O94822 1766 aa14.48□□□□□ -0.09
GGA3-213ENST00000582486 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
GGA3-213ENST00000582486 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
GGA3-213ENST00000582486 FRAT1Q92837 279 aaPredicted RBP14.47□□□□□ -0.09
GGA3-213ENST00000582486 CANXP27824 592 aaKnown RBP14.47□□□□□ -0.09
GGA3-213ENST00000582486 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
GGA3-213ENST00000582486 GNAI1P63096 354 aa14.46□□□□□ -0.09
GGA3-213ENST00000582486 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
GGA3-213ENST00000582486 USP19O94966 1318 aa14.46□□□□□ -0.09
GGA3-213ENST00000582486 ZNF853P0CG23 659 aa14.46□□□□□ -0.1
GGA3-213ENST00000582486 ARHGEF25Q86VW2 580 aa14.46□□□□□ -0.1
GGA3-213ENST00000582486 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
GGA3-213ENST00000582486 SLIT3O75094 1523 aa14.45□□□□□ -0.1
GGA3-213ENST00000582486 PDE3AQ14432 1141 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 MCM10Q7L590 875 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 TSHZ2Q9NRE2 1034 aa14.44□□□□□ -0.1
GGA3-213ENST00000582486 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
GGA3-213ENST00000582486 BRINP3Q76B58 766 aa14.43□□□□□ -0.1
GGA3-213ENST00000582486 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
GGA3-213ENST00000582486 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
GGA3-213ENST00000582486 ALS2Q96Q42 1657 aa14.43□□□□□ -0.1
GGA3-213ENST00000582486 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
GGA3-213ENST00000582486 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
GGA3-213ENST00000582486 GAS2L2Q8NHY3 880 aa14.42□□□□□ -0.1
GGA3-213ENST00000582486 SLAIN2Q9P270 581 aa14.42□□□□□ -0.1
GGA3-213ENST00000582486 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
GGA3-213ENST00000582486 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
GGA3-213ENST00000582486 ZC3H6P61129 1189 aaKnown RBP14.41□□□□□ -0.1
GGA3-213ENST00000582486 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
GGA3-213ENST00000582486 TSPYL6Q8N831 410 aa14.41□□□□□ -0.1
GGA3-213ENST00000582486 LRRC59Q96AG4 307 aaKnown RBP14.41□□□□□ -0.1
GGA3-213ENST00000582486 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
GGA3-213ENST00000582486 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
GGA3-213ENST00000582486 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
GGA3-213ENST00000582486 RLBP1P12271 317 aa14.4□□□□□ -0.1
GGA3-213ENST00000582486 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
GGA3-213ENST00000582486 PXDNQ92626 1479 aa14.4□□□□□ -0.1
GGA3-213ENST00000582486 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.11
GGA3-213ENST00000582486 VAMP4O75379 141 aa14.4□□□□□ -0.11
GGA3-213ENST00000582486 CABLES1Q8TDN4 633 aa14.4□□□□□ -0.11
GGA3-213ENST00000582486 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.11
GGA3-213ENST00000582486 TNS3Q68CZ2 1445 aa14.39□□□□□ -0.11
GGA3-213ENST00000582486 SPATA31A3Q5VYP0 1347 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms