RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
CDK5RAP3-225ENST00000582482 FOXO3O43524 673 aa13.66□□□□□ -0.22
CDK5RAP3-225ENST00000582482 REREQ9P2R6 1566 aa13.65□□□□□ -0.22
CDK5RAP3-225ENST00000582482 FCHSD2O94868 740 aa13.65□□□□□ -0.22
CDK5RAP3-225ENST00000582482 NFE2L2Q16236 605 aa13.65□□□□□ -0.22
CDK5RAP3-225ENST00000582482 SULT6B1Q6IMI4 303 aa13.65□□□□□ -0.22
CDK5RAP3-225ENST00000582482 ATP7BP35670 1465 aa13.65□□□□□ -0.22
CDK5RAP3-225ENST00000582482 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-225ENST00000582482 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-225ENST00000582482 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CDK5RAP3-225ENST00000582482 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-225ENST00000582482 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
CDK5RAP3-225ENST00000582482 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP3-225ENST00000582482 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-225ENST00000582482 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
CDK5RAP3-225ENST00000582482 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
CDK5RAP3-225ENST00000582482 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
CDK5RAP3-225ENST00000582482 VAMP4O75379 141 aa13.62□□□□□ -0.23
CDK5RAP3-225ENST00000582482 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-225ENST00000582482 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
CDK5RAP3-225ENST00000582482 CDC42BPGQ6DT37 1551 aa13.61□□□□□ -0.23
CDK5RAP3-225ENST00000582482 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-225ENST00000582482 RWDD1Q9H446 243 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-225ENST00000582482 RGPD8O14715 1765 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-225ENST00000582482 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-225ENST00000582482 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 NFKBIBQ15653 356 aa13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-225ENST00000582482 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.23
CDK5RAP3-225ENST00000582482 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
CDK5RAP3-225ENST00000582482 PEAK1Q9H792 1746 aa13.58□□□□□ -0.24
CDK5RAP3-225ENST00000582482 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
CDK5RAP3-225ENST00000582482 C3P01024 1663 aa13.58□□□□□ -0.24
CDK5RAP3-225ENST00000582482 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 APBB1O00213 710 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 USHBP1Q8N6Y0 703 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 IL16Q14005 1332 aa13.57□□□□□ -0.24
CDK5RAP3-225ENST00000582482 KCNA6P17658 529 aa13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 VIRMAQ69YN4 1812 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 AKAP12Q02952 1782 aa13.56□□□□□ -0.24
CDK5RAP3-225ENST00000582482 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
CDK5RAP3-225ENST00000582482 TECPR2O15040 1411 aa13.54□□□□□ -0.24
CDK5RAP3-225ENST00000582482 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-225ENST00000582482 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-225ENST00000582482 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
CDK5RAP3-225ENST00000582482 USP6P35125 1406 aa13.54□□□□□ -0.24
CDK5RAP3-225ENST00000582482 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 EID1Q9Y6B2 187 aa13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 KIF16BQ96L93 1317 aa13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 GNAI1P63096 354 aa13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-225ENST00000582482 KNDC1Q76NI1 1749 aa13.52□□□□□ -0.24
CDK5RAP3-225ENST00000582482 HDGFP51858 240 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-225ENST00000582482 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP3-225ENST00000582482 CFAP44Q96MT7 982 aa13.52□□□□□ -0.24
CDK5RAP3-225ENST00000582482 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 F6X3S4 739 aa13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 G2E3Q7L622 706 aa13.52□□□□□ -0.25
CDK5RAP3-225ENST00000582482 IPO8O15397 1037 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 NLRP6P59044 892 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 NRKQ7Z2Y5 1582 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 ALDH1L2Q3SY69 923 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 TBC1D32Q96NH3 1257 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
CDK5RAP3-225ENST00000582482 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 EYA1Q99502 592 aa13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 AMPHP49418 695 aa13.5□□□□□ -0.25
CDK5RAP3-225ENST00000582482 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
CDK5RAP3-225ENST00000582482 ARXQ96QS3 562 aa13.49□□□□□ -0.25
CDK5RAP3-225ENST00000582482 NUCB1Q02818 461 aa13.49□□□□□ -0.25
CDK5RAP3-225ENST00000582482 CHD1LQ86WJ1 897 aa13.49□□□□□ -0.25
CDK5RAP3-225ENST00000582482 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
CDK5RAP3-225ENST00000582482 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
CDK5RAP3-225ENST00000582482 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
CDK5RAP3-225ENST00000582482 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms