RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
RNF43-205ENST00000581868 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
RNF43-205ENST00000581868 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
RNF43-205ENST00000581868 NME9Q86XW9 330 aa17.11■□□□□ 0.33
RNF43-205ENST00000581868 CHMP4BQ9H444 224 aaKnown RBP17.11■□□□□ 0.33
RNF43-205ENST00000581868 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
RNF43-205ENST00000581868 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
RNF43-205ENST00000581868 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
RNF43-205ENST00000581868 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
RNF43-205ENST00000581868 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
RNF43-205ENST00000581868 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
RNF43-205ENST00000581868 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
RNF43-205ENST00000581868 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
RNF43-205ENST00000581868 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
RNF43-205ENST00000581868 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
RNF43-205ENST00000581868 DDIT3P35638 169 aa17.09■□□□□ 0.33
RNF43-205ENST00000581868 KIF2CQ99661 725 aa17.09■□□□□ 0.33
RNF43-205ENST00000581868 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
RNF43-205ENST00000581868 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
RNF43-205ENST00000581868 IL13P35225 146 aa17.09■□□□□ 0.33
RNF43-205ENST00000581868 DCTN1Q14203 1278 aa17.08■□□□□ 0.33
RNF43-205ENST00000581868 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
RNF43-205ENST00000581868 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.32
RNF43-205ENST00000581868 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.32
RNF43-205ENST00000581868 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
RNF43-205ENST00000581868 ABCC4O15439 1325 aa17.06■□□□□ 0.32
RNF43-205ENST00000581868 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
RNF43-205ENST00000581868 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
RNF43-205ENST00000581868 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
RNF43-205ENST00000581868 MRE11P49959 708 aa17.06■□□□□ 0.32
RNF43-205ENST00000581868 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
RNF43-205ENST00000581868 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
RNF43-205ENST00000581868 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
RNF43-205ENST00000581868 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
RNF43-205ENST00000581868 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
RNF43-205ENST00000581868 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
RNF43-205ENST00000581868 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
RNF43-205ENST00000581868 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
RNF43-205ENST00000581868 RICTORQ6R327 1708 aa17.04■□□□□ 0.32
RNF43-205ENST00000581868 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
RNF43-205ENST00000581868 COG3Q96JB2 828 aa17.03■□□□□ 0.32
RNF43-205ENST00000581868 CDC45O75419 566 aa17.03■□□□□ 0.32
RNF43-205ENST00000581868 ATP7BP35670 1465 aa17.03■□□□□ 0.32
RNF43-205ENST00000581868 WASLO00401 505 aaPredicted RBP17.02■□□□□ 0.32
RNF43-205ENST00000581868 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.32
RNF43-205ENST00000581868 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.32
RNF43-205ENST00000581868 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.32
RNF43-205ENST00000581868 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
RNF43-205ENST00000581868 MLECQ14165 292 aa17.01■□□□□ 0.31
RNF43-205ENST00000581868 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
RNF43-205ENST00000581868 APBB1O00213 710 aa17■□□□□ 0.31
RNF43-205ENST00000581868 KRT24Q2M2I5 525 aa17■□□□□ 0.31
RNF43-205ENST00000581868 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
RNF43-205ENST00000581868 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
RNF43-205ENST00000581868 EDC4Q6P2E9 1401 aaKnown RBP17■□□□□ 0.31
RNF43-205ENST00000581868 SSFA2P28290 1259 aa17■□□□□ 0.31
RNF43-205ENST00000581868 GAS2L3Q86XJ1 694 aa17■□□□□ 0.31
RNF43-205ENST00000581868 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
RNF43-205ENST00000581868 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
RNF43-205ENST00000581868 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
RNF43-205ENST00000581868 CPSF1Q10570 1443 aaKnown RBP16.98■□□□□ 0.31
RNF43-205ENST00000581868 SKOR2Q2VWA4 1001 aaPredicted RBP16.97■□□□□ 0.31
RNF43-205ENST00000581868 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
RNF43-205ENST00000581868 CDK12Q9NYV4 1490 aaPredicted RBP16.97■□□□□ 0.31
RNF43-205ENST00000581868 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
RNF43-205ENST00000581868 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
RNF43-205ENST00000581868 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
RNF43-205ENST00000581868 MCM10Q7L590 875 aa16.96■□□□□ 0.31
RNF43-205ENST00000581868 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
RNF43-205ENST00000581868 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
RNF43-205ENST00000581868 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.3
RNF43-205ENST00000581868 METP08581 1390 aa16.95■□□□□ 0.3
RNF43-205ENST00000581868 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
RNF43-205ENST00000581868 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
RNF43-205ENST00000581868 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
RNF43-205ENST00000581868 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
RNF43-205ENST00000581868 CPS1P31327 1500 aa16.95■□□□□ 0.3
RNF43-205ENST00000581868 CLCN1P35523 988 aa16.94■□□□□ 0.3
RNF43-205ENST00000581868 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
RNF43-205ENST00000581868 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
RNF43-205ENST00000581868 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
RNF43-205ENST00000581868 DLG5Q8TDM6 1919 aa16.93■□□□□ 0.3
RNF43-205ENST00000581868 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
RNF43-205ENST00000581868 SOX12O15370 315 aa16.93■□□□□ 0.3
RNF43-205ENST00000581868 PTMSP20962 102 aa16.93■□□□□ 0.3
RNF43-205ENST00000581868 RABEP1Q15276 862 aa16.93■□□□□ 0.3
RNF43-205ENST00000581868 CEP85Q6P2H3 762 aa16.92■□□□□ 0.3
RNF43-205ENST00000581868 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
RNF43-205ENST00000581868 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
RNF43-205ENST00000581868 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
RNF43-205ENST00000581868 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
RNF43-205ENST00000581868 FAM69CQ0P6D2 419 aa16.92■□□□□ 0.3
RNF43-205ENST00000581868 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
RNF43-205ENST00000581868 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
RNF43-205ENST00000581868 SDSP20132 328 aa16.91■□□□□ 0.3
RNF43-205ENST00000581868 MEIS3Q99687 375 aa16.91■□□□□ 0.3
RNF43-205ENST00000581868 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
RNF43-205ENST00000581868 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
RNF43-205ENST00000581868 ESPNB1AK53 854 aa16.91■□□□□ 0.3
RNF43-205ENST00000581868 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms