RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 FMN2Q9NZ56 1722 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 PRR36Q9H6K5 1346 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 ATP7BP35670 1465 aa9.78□□□□□ -0.84
DDX42-213ENST00000581477 XIRP1Q702N8 1843 aaKnown RBP9.77□□□□□ -0.84
DDX42-213ENST00000581477 PANK3Q9H999 370 aa9.77□□□□□ -0.85
DDX42-213ENST00000581477 USP32Q8NFA0 1604 aa9.77□□□□□ -0.85
DDX42-213ENST00000581477 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.85
DDX42-213ENST00000581477 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
DDX42-213ENST00000581477 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
DDX42-213ENST00000581477 RBM33Q96EV2 1170 aaKnown RBP9.76□□□□□ -0.85
DDX42-213ENST00000581477 CABP1Q9NZU7 370 aa9.76□□□□□ -0.85
DDX42-213ENST00000581477 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
DDX42-213ENST00000581477 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
DDX42-213ENST00000581477 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
DDX42-213ENST00000581477 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 IRX2Q9BZI1 471 aaPredicted RBP9.75□□□□□ -0.85
DDX42-213ENST00000581477 TERF2IPQ9NYB0 399 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
DDX42-213ENST00000581477 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
DDX42-213ENST00000581477 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
DDX42-213ENST00000581477 RGPD8O14715 1765 aaPredicted RBP9.74□□□□□ -0.85
DDX42-213ENST00000581477 PYGBP11216 843 aa9.74□□□□□ -0.85
DDX42-213ENST00000581477 LSM11P83369 360 aaKnown RBP eCLIP9.74□□□□□ -0.85
DDX42-213ENST00000581477 ZNF467Q7Z7K2 595 aaPredicted RBP9.74□□□□□ -0.85
DDX42-213ENST00000581477 C14orf37Q86TY3 774 aa9.74□□□□□ -0.85
DDX42-213ENST00000581477 RGS20O76081 388 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
DDX42-213ENST00000581477 MSH6P52701 1360 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
DDX42-213ENST00000581477 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
DDX42-213ENST00000581477 HDGFL2Q7Z4V5 671 aaPredicted RBP9.72□□□□□ -0.85
DDX42-213ENST00000581477 KTN1Q86UP2 1357 aaKnown RBP9.72□□□□□ -0.85
DDX42-213ENST00000581477 MST1RQ04912 1400 aa9.72□□□□□ -0.85
DDX42-213ENST00000581477 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
DDX42-213ENST00000581477 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
DDX42-213ENST00000581477 ANP32CO43423 234 aa9.71□□□□□ -0.86
DDX42-213ENST00000581477 ATF3P18847 181 aa9.71□□□□□ -0.86
DDX42-213ENST00000581477 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
DDX42-213ENST00000581477 ACEP12821 1306 aa9.71□□□□□ -0.86
DDX42-213ENST00000581477 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
DDX42-213ENST00000581477 BRD4O60885 1362 aaPredicted RBP9.7□□□□□ -0.86
DDX42-213ENST00000581477 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
DDX42-213ENST00000581477 SSH2Q76I76 1423 aa9.7□□□□□ -0.86
DDX42-213ENST00000581477 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
DDX42-213ENST00000581477 USP6P35125 1406 aa9.69□□□□□ -0.86
DDX42-213ENST00000581477 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
DDX42-213ENST00000581477 RALBP1Q15311 655 aa9.69□□□□□ -0.86
DDX42-213ENST00000581477 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
DDX42-213ENST00000581477 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
DDX42-213ENST00000581477 KIF1AQ12756 1690 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 NRKQ7Z2Y5 1582 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 NSD2O96028 1365 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 ESCO1Q5FWF5 840 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 PMFBP1Q8TBY8 1022 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 ORAI2Q96SN7 254 aa9.68□□□□□ -0.86
DDX42-213ENST00000581477 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
DDX42-213ENST00000581477 FYB1O15117 783 aa9.67□□□□□ -0.86
DDX42-213ENST00000581477 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
DDX42-213ENST00000581477 NGDNQ8NEJ9 315 aaKnown RBP9.67□□□□□ -0.86
DDX42-213ENST00000581477 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
DDX42-213ENST00000581477 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
DDX42-213ENST00000581477 TTC21BQ7Z4L5 1316 aa9.66□□□□□ -0.86
DDX42-213ENST00000581477 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
DDX42-213ENST00000581477 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
DDX42-213ENST00000581477 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.86
DDX42-213ENST00000581477 CC2D1BQ5T0F9 858 aaKnown RBP9.65□□□□□ -0.86
DDX42-213ENST00000581477 CIZ1Q9ULV3 898 aaPredicted RBP9.65□□□□□ -0.86
DDX42-213ENST00000581477 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.86
DDX42-213ENST00000581477 MYBBP1AQ9BQG0 1328 aaKnown RBP9.64□□□□□ -0.87
DDX42-213ENST00000581477 FOXO3O43524 673 aa9.64□□□□□ -0.87
DDX42-213ENST00000581477 PSME1Q06323 249 aa9.64□□□□□ -0.87
DDX42-213ENST00000581477 BRINP3Q76B58 766 aa9.64□□□□□ -0.87
DDX42-213ENST00000581477 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
DDX42-213ENST00000581477 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
DDX42-213ENST00000581477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX42-213ENST00000581477 USP54Q70EL1 1684 aa9.63□□□□□ -0.87
DDX42-213ENST00000581477 TRPM3Q9HCF6 1732 aaPredicted RBP9.62□□□□□ -0.87
DDX42-213ENST00000581477 NPHP3Q7Z494 1330 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 KRT28Q7Z3Y7 464 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 NME9Q86XW9 330 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
DDX42-213ENST00000581477 PXDNQ92626 1479 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 PBX2P40425 430 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
DDX42-213ENST00000581477 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
DDX42-213ENST00000581477 TOM1O60784 492 aa9.6□□□□□ -0.87
DDX42-213ENST00000581477 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
DDX42-213ENST00000581477 CNGB1Q14028 1251 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms