RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 SAFB2Q14151 953 aaKnown RBP eCLIP10.61□□□□□ -0.71
RIOK3-204ENST00000581220 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
RIOK3-204ENST00000581220 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
RIOK3-204ENST00000581220 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
RIOK3-204ENST00000581220 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
RIOK3-204ENST00000581220 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
RIOK3-204ENST00000581220 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
RIOK3-204ENST00000581220 BRPF1P55201 1214 aaPredicted RBP10.59□□□□□ -0.71
RIOK3-204ENST00000581220 GAS2L3Q86XJ1 694 aa10.59□□□□□ -0.71
RIOK3-204ENST00000581220 FYB1O15117 783 aa10.59□□□□□ -0.71
RIOK3-204ENST00000581220 FCHSD2O94868 740 aa10.59□□□□□ -0.71
RIOK3-204ENST00000581220 TBC1D9Q6ZT07 1266 aa10.59□□□□□ -0.71
RIOK3-204ENST00000581220 KIF2CQ99661 725 aa10.59□□□□□ -0.71
RIOK3-204ENST00000581220 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
RIOK3-204ENST00000581220 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
RIOK3-204ENST00000581220 ARHGAP45Q92619 1136 aa10.58□□□□□ -0.72
RIOK3-204ENST00000581220 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
RIOK3-204ENST00000581220 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
RIOK3-204ENST00000581220 CALD1Q05682 793 aaKnown RBP10.58□□□□□ -0.72
RIOK3-204ENST00000581220 HDGFL2Q7Z4V5 671 aaPredicted RBP10.58□□□□□ -0.72
RIOK3-204ENST00000581220 STK26Q9P289 416 aa10.58□□□□□ -0.72
RIOK3-204ENST00000581220 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 ERBB4Q15303 1308 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 PPIP5K1Q6PFW1 1433 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 MED14O60244 1454 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 HSPA1LP34931 641 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 AGLP35573 1532 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 CDC45O75419 566 aa10.57□□□□□ -0.72
RIOK3-204ENST00000581220 DDX49Q9Y6V7 483 aaKnown RBP10.57□□□□□ -0.72
RIOK3-204ENST00000581220 LRP5O75197 1615 aa10.56□□□□□ -0.72
RIOK3-204ENST00000581220 CAMSAP1Q5T5Y3 1602 aa10.56□□□□□ -0.72
RIOK3-204ENST00000581220 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
RIOK3-204ENST00000581220 SSFA2P28290 1259 aa10.56□□□□□ -0.72
RIOK3-204ENST00000581220 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
RIOK3-204ENST00000581220 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
RIOK3-204ENST00000581220 TPM2P07951 284 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
RIOK3-204ENST00000581220 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
RIOK3-204ENST00000581220 ZFYVE9O95405 1425 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 VAMP4O75379 141 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 KLHL40Q2TBA0 621 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 CLEC17AQ6ZS10 378 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 PNPLA6Q8IY17 1366 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
RIOK3-204ENST00000581220 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
RIOK3-204ENST00000581220 GNAI1P63096 354 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 RABEP1Q15276 862 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 PPP1R9BQ96SB3 815 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
RIOK3-204ENST00000581220 IBTKQ9P2D0 1353 aaPredicted RBP10.54□□□□□ -0.72
RIOK3-204ENST00000581220 ABCC3O15438 1527 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 PIK3R4Q99570 1358 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 NUCB2P80303 420 aa10.54□□□□□ -0.72
RIOK3-204ENST00000581220 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
RIOK3-204ENST00000581220 MSNP26038 577 aaKnown RBP10.53□□□□□ -0.72
RIOK3-204ENST00000581220 ZSCAN30Q86W11 494 aa10.53□□□□□ -0.72
RIOK3-204ENST00000581220 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
RIOK3-204ENST00000581220 IFT57Q9NWB7 429 aa10.53□□□□□ -0.72
RIOK3-204ENST00000581220 PIK3C2BO00750 1634 aa10.53□□□□□ -0.72
RIOK3-204ENST00000581220 LRRC7Q96NW7 1537 aa10.53□□□□□ -0.72
RIOK3-204ENST00000581220 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.72
RIOK3-204ENST00000581220 NCLP19338 710 aaKnown RBP10.52□□□□□ -0.73
RIOK3-204ENST00000581220 SIRT2Q8IXJ6 389 aa10.52□□□□□ -0.73
RIOK3-204ENST00000581220 PRAM1Q96QH2 718 aa10.52□□□□□ -0.73
RIOK3-204ENST00000581220 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
RIOK3-204ENST00000581220 ABCC4O15439 1325 aa10.52□□□□□ -0.73
RIOK3-204ENST00000581220 MCTP1Q6DN14 999 aa10.52□□□□□ -0.73
RIOK3-204ENST00000581220 KIF20BQ96Q89 1820 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 CDC42BPGQ6DT37 1551 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
RIOK3-204ENST00000581220 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 TSPYL6Q8N831 410 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 CD163L1Q9NR16 1453 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 C3P01024 1663 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 SIGLEC1Q9BZZ2 1709 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 HMOX1P09601 288 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 ZNF445P59923 1031 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 IDI1Q13907 227 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 TWISTNBQ3B726 338 aaPredicted RBP10.51□□□□□ -0.73
RIOK3-204ENST00000581220 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
RIOK3-204ENST00000581220 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
RIOK3-204ENST00000581220 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
RIOK3-204ENST00000581220 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
RIOK3-204ENST00000581220 AK9Q5TCS8 1911 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 CDK19Q9BWU1 502 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
RIOK3-204ENST00000581220 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
RIOK3-204ENST00000581220 TTC22Q5TAA0 569 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
RIOK3-204ENST00000581220 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.5□□□□□ -0.73
RIOK3-204ENST00000581220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms