RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 KIDINS220Q9ULH0 1771 aa8.92□□□□□ -0.98
PTPRM-213ENST00000580949 CFAP74Q9C0B2 1584 aa8.92□□□□□ -0.98
PTPRM-213ENST00000580949 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
PTPRM-213ENST00000580949 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
PTPRM-213ENST00000580949 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
PTPRM-213ENST00000580949 DDX11L8A8MPP1 907 aa8.91□□□□□ -0.98
PTPRM-213ENST00000580949 SLC10A3P09131 477 aa8.91□□□□□ -0.98
PTPRM-213ENST00000580949 PTPN5P54829 565 aa8.91□□□□□ -0.98
PTPRM-213ENST00000580949 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
PTPRM-213ENST00000580949 WBP1LQ9NX94 342 aa8.91□□□□□ -0.98
PTPRM-213ENST00000580949 A2MP01023 1474 aa8.9□□□□□ -0.98
PTPRM-213ENST00000580949 NBPF8Q3BBV2 869 aa8.9□□□□□ -0.98
PTPRM-213ENST00000580949 PPRC1Q5VV67 1664 aaKnown RBP8.9□□□□□ -0.98
PTPRM-213ENST00000580949 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
PTPRM-213ENST00000580949 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-213ENST00000580949 YEATS2Q9ULM3 1422 aa8.89□□□□□ -0.99
PTPRM-213ENST00000580949 CD46P15529 392 aa8.89□□□□□ -0.99
PTPRM-213ENST00000580949 IQGAP3Q86VI3 1631 aa8.89□□□□□ -0.99
PTPRM-213ENST00000580949 FRMPD1Q5SYB0 1578 aa8.89□□□□□ -0.99
PTPRM-213ENST00000580949 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-213ENST00000580949 RDH13Q8NBN7 331 aa8.88□□□□□ -0.99
PTPRM-213ENST00000580949 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
PTPRM-213ENST00000580949 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 VWDEQ8N2E2 1590 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 HECW2Q9P2P5 1572 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 CFHP08603 1231 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
PTPRM-213ENST00000580949 PLSCR2Q9NRY7 297 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 ATP10AO60312 1499 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
PTPRM-213ENST00000580949 KANK1Q14678 1352 aa8.86□□□□□ -0.99
PTPRM-213ENST00000580949 RICTORQ6R327 1708 aa8.86□□□□□ -0.99
PTPRM-213ENST00000580949 GCGRP47871 477 aa8.86□□□□□ -0.99
PTPRM-213ENST00000580949 GGT6Q6P531 493 aa8.86□□□□□ -0.99
PTPRM-213ENST00000580949 HIRIP3Q9BW71 556 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-213ENST00000580949 DIP2CQ9Y2E4 1556 aa8.86□□□□□ -0.99
PTPRM-213ENST00000580949 KIF13AQ9H1H9 1805 aa8.85□□□□□ -0.99
PTPRM-213ENST00000580949 APLP1P51693 650 aa8.85□□□□□ -0.99
PTPRM-213ENST00000580949 PTPRTO14522 1441 aa8.85□□□□□ -0.99
PTPRM-213ENST00000580949 TSPOAP1O95153 1857 aa8.85□□□□□ -0.99
PTPRM-213ENST00000580949 ZMYM4Q5VZL5 1548 aa8.85□□□□□ -0.99
PTPRM-213ENST00000580949 EIF2AK4Q9P2K8 1649 aaKnown RBP8.84□□□□□ -0.99
PTPRM-213ENST00000580949 CCDC144AA2RUR9 1427 aa8.84□□□□□ -0.99
PTPRM-213ENST00000580949 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
PTPRM-213ENST00000580949 MS4A1P11836 297 aa8.84□□□□□ -0.99
PTPRM-213ENST00000580949 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-213ENST00000580949 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
PTPRM-213ENST00000580949 KDM4CQ9H3R0 1056 aa8.84□□□□□ -0.99
PTPRM-213ENST00000580949 GPBP1L1Q9HC44 474 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-213ENST00000580949 PRDM15P57071 1507 aaPredicted RBP8.84□□□□□ -0.99
PTPRM-213ENST00000580949 RGL3Q3MIN7 710 aa8.83□□□□□ -1
PTPRM-213ENST00000580949 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
PTPRM-213ENST00000580949 RNF17Q9BXT8 1623 aaKnown RBP8.83□□□□□ -1
PTPRM-213ENST00000580949 LMTK2Q8IWU2 1503 aa8.82□□□□□ -1
PTPRM-213ENST00000580949 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
PTPRM-213ENST00000580949 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
PTPRM-213ENST00000580949 E9PCH4 1651 aa8.81□□□□□ -1
PTPRM-213ENST00000580949 WASHC2CQ9Y4E1 1318 aa8.81□□□□□ -1
PTPRM-213ENST00000580949 UHRF1BP1Q6BDS2 1440 aa8.81□□□□□ -1
PTPRM-213ENST00000580949 SPATA31E1Q6ZUB1 1445 aa8.81□□□□□ -1
PTPRM-213ENST00000580949 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
PTPRM-213ENST00000580949 TET3O43151 1660 aa8.81□□□□□ -1
PTPRM-213ENST00000580949 ABCC3O15438 1527 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 KDM4AO75164 1064 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 USP46P62068 366 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 BCORL1Q5H9F3 1711 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 TRPM2O94759 1503 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 NPATQ14207 1427 aa8.8□□□□□ -1
PTPRM-213ENST00000580949 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
PTPRM-213ENST00000580949 EFCAB6Q5THR3 1501 aa8.79□□□□□ -1
PTPRM-213ENST00000580949 ATP6V1AP38606 617 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
PTPRM-213ENST00000580949 FUT2Q10981 343 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 DIXDC1Q155Q3 683 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
PTPRM-213ENST00000580949 AGLP35573 1532 aa8.77□□□□□ -1.01
PTPRM-213ENST00000580949 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-213ENST00000580949 DDX10Q13206 875 aaKnown RBP8.77□□□□□ -1.01
PTPRM-213ENST00000580949 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
PTPRM-213ENST00000580949 PRAG1Q86YV5 1406 aa8.77□□□□□ -1.01
PTPRM-213ENST00000580949 UGGT1Q9NYU2 1555 aa8.77□□□□□ -1.01
PTPRM-213ENST00000580949 CLTCL1P53675 1640 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 MLECQ14165 292 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 SPIRE2Q8WWL2 714 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 MTRQ99707 1265 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 NOS1P29475 1434 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 ARHGAP31Q2M1Z3 1444 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 REREQ9P2R6 1566 aa8.76□□□□□ -1.01
PTPRM-213ENST00000580949 CEP152O94986 1710 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 SIGLEC1Q9BZZ2 1709 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 HOXA2O43364 376 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
PTPRM-213ENST00000580949 TJAP1Q5JTD0 557 aa8.75□□□□□ -1.01
PTPRM-213ENST00000580949 MORN1Q5T089 497 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms