RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
RFFL-207ENST00000580569 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
RFFL-207ENST00000580569 DISP2A7MBM2 1401 aa10.7□□□□□ -0.7
RFFL-207ENST00000580569 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
RFFL-207ENST00000580569 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
RFFL-207ENST00000580569 PNISRQ8TF01 805 aaKnown RBP10.7□□□□□ -0.7
RFFL-207ENST00000580569 PANK3Q9H999 370 aa10.7□□□□□ -0.7
RFFL-207ENST00000580569 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
RFFL-207ENST00000580569 HNRNPUQ00839 825 aaKnown RBP eCLIP10.69□□□□□ -0.7
RFFL-207ENST00000580569 XPCQ01831 940 aaPredicted RBP10.69□□□□□ -0.7
RFFL-207ENST00000580569 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
RFFL-207ENST00000580569 TNS3Q68CZ2 1445 aa10.68□□□□□ -0.7
RFFL-207ENST00000580569 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
RFFL-207ENST00000580569 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
RFFL-207ENST00000580569 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
RFFL-207ENST00000580569 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
RFFL-207ENST00000580569 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
RFFL-207ENST00000580569 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
RFFL-207ENST00000580569 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
RFFL-207ENST00000580569 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
RFFL-207ENST00000580569 THSD7AQ9UPZ6 1657 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 INSRP06213 1382 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 ABCC11Q96J66 1382 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFFL-207ENST00000580569 KRT28Q7Z3Y7 464 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 TULP4Q9NRJ4 1543 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 RREB1Q92766 1687 aa10.66□□□□□ -0.7
RFFL-207ENST00000580569 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
RFFL-207ENST00000580569 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.7
RFFL-207ENST00000580569 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
RFFL-207ENST00000580569 ADGRB2O60241 1585 aa10.65□□□□□ -0.71
RFFL-207ENST00000580569 ARHGEF10O15013 1369 aa10.65□□□□□ -0.71
RFFL-207ENST00000580569 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
RFFL-207ENST00000580569 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
RFFL-207ENST00000580569 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
RFFL-207ENST00000580569 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
RFFL-207ENST00000580569 PSME1Q06323 249 aa10.64□□□□□ -0.71
RFFL-207ENST00000580569 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
RFFL-207ENST00000580569 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
RFFL-207ENST00000580569 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
RFFL-207ENST00000580569 UTRNP46939 3433 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 NUTM2FA1L443 756 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
RFFL-207ENST00000580569 TMEM132EQ6IEE7 984 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 WAPLQ7Z5K2 1190 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
RFFL-207ENST00000580569 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
RFFL-207ENST00000580569 NUP188Q5SRE5 1749 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 ANKRD26Q9UPS8 1709 aa10.63□□□□□ -0.71
RFFL-207ENST00000580569 FAM83GA6ND36 823 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 PYGBP11216 843 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 DLC1Q96QB1 1528 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 PLEKHH1Q9ULM0 1364 aa10.62□□□□□ -0.71
RFFL-207ENST00000580569 YY1P25490 414 aa10.61□□□□□ -0.71
RFFL-207ENST00000580569 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
RFFL-207ENST00000580569 PHF8Q9UPP1 1060 aa10.61□□□□□ -0.71
RFFL-207ENST00000580569 TRAK1Q9UPV9 953 aa10.61□□□□□ -0.71
RFFL-207ENST00000580569 SMG6Q86US8 1419 aaKnown RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 YTHDC2Q9H6S0 1430 aaKnown RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
RFFL-207ENST00000580569 CAMKK2Q96RR4 588 aa10.6□□□□□ -0.71
RFFL-207ENST00000580569 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
RFFL-207ENST00000580569 CHD4Q14839 1912 aa10.6□□□□□ -0.71
RFFL-207ENST00000580569 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
RFFL-207ENST00000580569 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
RFFL-207ENST00000580569 EZH2Q15910 746 aaKnown RBP10.59□□□□□ -0.71
RFFL-207ENST00000580569 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 A0A0G2JS52 829 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 PPP2R1AP30153 589 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 MYT1Q01538 1121 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 STK26Q9P289 416 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 KNSTRNQ9Y448 316 aa10.58□□□□□ -0.72
RFFL-207ENST00000580569 RGPD3A6NKT7 1758 aaPredicted RBP10.57□□□□□ -0.72
RFFL-207ENST00000580569 RGPD4Q7Z3J3 1758 aa10.57□□□□□ -0.72
RFFL-207ENST00000580569 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
RFFL-207ENST00000580569 NINLQ9Y2I6 1382 aa10.56□□□□□ -0.72
RFFL-207ENST00000580569 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
RFFL-207ENST00000580569 FAM196AQ6ZSG2 479 aa10.56□□□□□ -0.72
RFFL-207ENST00000580569 CLEC11AQ9Y240 323 aa10.56□□□□□ -0.72
RFFL-207ENST00000580569 SBF2Q86WG5 1849 aa10.56□□□□□ -0.72
RFFL-207ENST00000580569 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
RFFL-207ENST00000580569 RNF123Q5XPI4 1314 aa10.55□□□□□ -0.72
RFFL-207ENST00000580569 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
RFFL-207ENST00000580569 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
RFFL-207ENST00000580569 CAMTA1Q9Y6Y1 1673 aa10.54□□□□□ -0.72
RFFL-207ENST00000580569 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
RFFL-207ENST00000580569 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
RFFL-207ENST00000580569 EVC2Q86UK5 1308 aa10.54□□□□□ -0.72
RFFL-207ENST00000580569 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
RFFL-207ENST00000580569 NSD3Q9BZ95 1437 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms