RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
RTTN-202ENST00000578780 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
RTTN-202ENST00000578780 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
RTTN-202ENST00000578780 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
RTTN-202ENST00000578780 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
RTTN-202ENST00000578780 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
RTTN-202ENST00000578780 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
RTTN-202ENST00000578780 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
RTTN-202ENST00000578780 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
RTTN-202ENST00000578780 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 E9PSI1 815 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
RTTN-202ENST00000578780 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
RTTN-202ENST00000578780 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
RTTN-202ENST00000578780 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
RTTN-202ENST00000578780 MS4A1P11836 297 aa12.84□□□□□ -0.35
RTTN-202ENST00000578780 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
RTTN-202ENST00000578780 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
RTTN-202ENST00000578780 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
RTTN-202ENST00000578780 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 IL13P35225 146 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 HSPA2P54652 639 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
RTTN-202ENST00000578780 FCHSD2O94868 740 aa12.82□□□□□ -0.36
RTTN-202ENST00000578780 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
RTTN-202ENST00000578780 SOX12O15370 315 aa12.82□□□□□ -0.36
RTTN-202ENST00000578780 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
RTTN-202ENST00000578780 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
RTTN-202ENST00000578780 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
RTTN-202ENST00000578780 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
RTTN-202ENST00000578780 HMOX1P09601 288 aa12.8□□□□□ -0.36
RTTN-202ENST00000578780 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
RTTN-202ENST00000578780 NLRP6P59044 892 aa12.8□□□□□ -0.36
RTTN-202ENST00000578780 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
RTTN-202ENST00000578780 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
RTTN-202ENST00000578780 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
RTTN-202ENST00000578780 PLIN1O60240 522 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
RTTN-202ENST00000578780 RIPK4P57078 832 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 PSME1Q06323 249 aa12.78□□□□□ -0.36
RTTN-202ENST00000578780 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
RTTN-202ENST00000578780 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
RTTN-202ENST00000578780 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.36
RTTN-202ENST00000578780 ORAI2Q96SN7 254 aa12.77□□□□□ -0.36
RTTN-202ENST00000578780 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.36
RTTN-202ENST00000578780 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.36
RTTN-202ENST00000578780 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
RTTN-202ENST00000578780 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
RTTN-202ENST00000578780 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
RTTN-202ENST00000578780 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
RTTN-202ENST00000578780 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
RTTN-202ENST00000578780 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
RTTN-202ENST00000578780 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
RTTN-202ENST00000578780 FOXO3O43524 673 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 AMPHP49418 695 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 TPM2P07951 284 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 XRCC6P12956 609 aaKnown RBP eCLIP12.74□□□□□ -0.37
RTTN-202ENST00000578780 NFE2L2Q16236 605 aa12.74□□□□□ -0.37
RTTN-202ENST00000578780 ATF3P18847 181 aa12.73□□□□□ -0.37
RTTN-202ENST00000578780 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
RTTN-202ENST00000578780 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.73□□□□□ -0.37
RTTN-202ENST00000578780 FLT4P35916 1363 aa12.73□□□□□ -0.37
RTTN-202ENST00000578780 STRCP1A6NGW2 1772 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 BCAR3O75815 825 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
RTTN-202ENST00000578780 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 IL16Q14005 1332 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
RTTN-202ENST00000578780 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
RTTN-202ENST00000578780 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
RTTN-202ENST00000578780 CRBNQ96SW2 442 aa12.71□□□□□ -0.37
RTTN-202ENST00000578780 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
RTTN-202ENST00000578780 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
RTTN-202ENST00000578780 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.38
RTTN-202ENST00000578780 HOXC9P31274 260 aa12.7□□□□□ -0.38
RTTN-202ENST00000578780 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
RTTN-202ENST00000578780 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
RTTN-202ENST00000578780 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
RTTN-202ENST00000578780 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
RTTN-202ENST00000578780 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
RTTN-202ENST00000578780 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 DCCP43146 1447 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 MST1RQ04912 1400 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 RGPD1P0DJD0 1748 aa12.68□□□□□ -0.38
RTTN-202ENST00000578780 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
RTTN-202ENST00000578780 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms