RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
SKA2-204ENST00000578519 DSG3P32926 999 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 GNAI1P63096 354 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 CRBNQ96SW2 442 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
SKA2-204ENST00000578519 FLT4P35916 1363 aa14.34□□□□□ -0.11
SKA2-204ENST00000578519 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.12
SKA2-204ENST00000578519 C19orf44Q9H6X5 657 aa14.33□□□□□ -0.12
SKA2-204ENST00000578519 IPO8O15397 1037 aaKnown RBP14.32□□□□□ -0.12
SKA2-204ENST00000578519 HMOX1P09601 288 aa14.32□□□□□ -0.12
SKA2-204ENST00000578519 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
SKA2-204ENST00000578519 EIF4A2Q14240 407 aaKnown RBP14.32□□□□□ -0.12
SKA2-204ENST00000578519 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
SKA2-204ENST00000578519 FBLN1P23142 703 aa14.31□□□□□ -0.12
SKA2-204ENST00000578519 IFT57Q9NWB7 429 aa14.31□□□□□ -0.12
SKA2-204ENST00000578519 ATF3P18847 181 aa14.3□□□□□ -0.12
SKA2-204ENST00000578519 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
SKA2-204ENST00000578519 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
SKA2-204ENST00000578519 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
SKA2-204ENST00000578519 BCAR3O75815 825 aa14.29□□□□□ -0.12
SKA2-204ENST00000578519 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
SKA2-204ENST00000578519 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
SKA2-204ENST00000578519 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
SKA2-204ENST00000578519 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
SKA2-204ENST00000578519 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
SKA2-204ENST00000578519 RTL1A6NKG5 1358 aa14.28□□□□□ -0.12
SKA2-204ENST00000578519 TCERG1O14776 1098 aaKnown RBP14.28□□□□□ -0.12
SKA2-204ENST00000578519 ZKSCAN2Q63HK3 967 aa14.28□□□□□ -0.12
SKA2-204ENST00000578519 KIF16BQ96L93 1317 aa14.27□□□□□ -0.12
SKA2-204ENST00000578519 HTATSF1O43719 755 aaKnown RBP14.27□□□□□ -0.13
SKA2-204ENST00000578519 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
SKA2-204ENST00000578519 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.13
SKA2-204ENST00000578519 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
SKA2-204ENST00000578519 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.13
SKA2-204ENST00000578519 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.13
SKA2-204ENST00000578519 SOX12O15370 315 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 HSP90AB2PQ58FF8 381 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
SKA2-204ENST00000578519 DCCP43146 1447 aa14.25□□□□□ -0.13
SKA2-204ENST00000578519 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
SKA2-204ENST00000578519 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
SKA2-204ENST00000578519 HOXC9P31274 260 aa14.23□□□□□ -0.13
SKA2-204ENST00000578519 BRPF1P55201 1214 aaPredicted RBP14.23□□□□□ -0.13
SKA2-204ENST00000578519 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
SKA2-204ENST00000578519 KRT28Q7Z3Y7 464 aa14.23□□□□□ -0.13
SKA2-204ENST00000578519 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
SKA2-204ENST00000578519 IP6K1Q92551 441 aa14.23□□□□□ -0.13
SKA2-204ENST00000578519 TSR2Q969E8 191 aaKnown RBP14.23□□□□□ -0.13
SKA2-204ENST00000578519 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
SKA2-204ENST00000578519 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
SKA2-204ENST00000578519 ZNF853P0CG23 659 aa14.22□□□□□ -0.13
SKA2-204ENST00000578519 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
SKA2-204ENST00000578519 NUTM2GQ5VZR2 741 aa14.21□□□□□ -0.13
SKA2-204ENST00000578519 ARHGAP45Q92619 1136 aa14.21□□□□□ -0.13
SKA2-204ENST00000578519 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
SKA2-204ENST00000578519 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.13
SKA2-204ENST00000578519 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.13
SKA2-204ENST00000578519 MSH6P52701 1360 aa14.21□□□□□ -0.14
SKA2-204ENST00000578519 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 C1orf167Q5SNV9 1468 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 FOXO3O43524 673 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 RBM33Q96EV2 1170 aaKnown RBP14.2□□□□□ -0.14
SKA2-204ENST00000578519 EYA1Q99502 592 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 BABAM1Q9NWV8 329 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 DDX19BQ9UMR2 479 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 KDRP35968 1356 aa14.2□□□□□ -0.14
SKA2-204ENST00000578519 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
SKA2-204ENST00000578519 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
SKA2-204ENST00000578519 RWDD1Q9H446 243 aaPredicted RBP14.19□□□□□ -0.14
SKA2-204ENST00000578519 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
SKA2-204ENST00000578519 TMEM94Q12767 1356 aa14.19□□□□□ -0.14
SKA2-204ENST00000578519 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
SKA2-204ENST00000578519 MVPQ14764 893 aaKnown RBP14.18□□□□□ -0.14
SKA2-204ENST00000578519 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
SKA2-204ENST00000578519 AEBP1Q8IUX7 1158 aa14.18□□□□□ -0.14
SKA2-204ENST00000578519 SOS1Q07889 1333 aaPredicted RBP14.17□□□□□ -0.14
SKA2-204ENST00000578519 VAMP4O75379 141 aa14.17□□□□□ -0.14
SKA2-204ENST00000578519 GCP02774 474 aa14.17□□□□□ -0.14
SKA2-204ENST00000578519 TWISTNBQ3B726 338 aaPredicted RBP14.17□□□□□ -0.14
SKA2-204ENST00000578519 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
SKA2-204ENST00000578519 API5Q9BZZ5 524 aaKnown RBP14.17□□□□□ -0.14
SKA2-204ENST00000578519 MBIPQ9NS73 344 aa14.17□□□□□ -0.14
SKA2-204ENST00000578519 GNAT3A8MTJ3 354 aa14.16□□□□□ -0.14
SKA2-204ENST00000578519 CHL1O00533 1208 aa14.16□□□□□ -0.14
SKA2-204ENST00000578519 BCL2L13Q9BXK5 485 aa14.16□□□□□ -0.14
SKA2-204ENST00000578519 NOB1Q9ULX3 412 aaKnown RBP14.16□□□□□ -0.14
SKA2-204ENST00000578519 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
SKA2-204ENST00000578519 MST1RQ04912 1400 aa14.15□□□□□ -0.14
SKA2-204ENST00000578519 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms