RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
RAB40B-211ENST00000576359 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
RAB40B-211ENST00000576359 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
RAB40B-211ENST00000576359 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
RAB40B-211ENST00000576359 NEFMP07197 916 aa17.97■□□□□ 0.47
RAB40B-211ENST00000576359 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
RAB40B-211ENST00000576359 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
RAB40B-211ENST00000576359 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
RAB40B-211ENST00000576359 PLEKHG3A1L390 1219 aa17.96■□□□□ 0.47
RAB40B-211ENST00000576359 EID1Q9Y6B2 187 aa17.96■□□□□ 0.47
RAB40B-211ENST00000576359 USP6P35125 1406 aa17.96■□□□□ 0.47
RAB40B-211ENST00000576359 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
RAB40B-211ENST00000576359 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
RAB40B-211ENST00000576359 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
RAB40B-211ENST00000576359 PEAK1Q9H792 1746 aa17.93■□□□□ 0.46
RAB40B-211ENST00000576359 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
RAB40B-211ENST00000576359 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
RAB40B-211ENST00000576359 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
RAB40B-211ENST00000576359 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
RAB40B-211ENST00000576359 PTCH1Q13635 1447 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 SSH2Q76I76 1423 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
RAB40B-211ENST00000576359 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
RAB40B-211ENST00000576359 DAXXQ9UER7 740 aaPredicted RBP17.91■□□□□ 0.46
RAB40B-211ENST00000576359 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
RAB40B-211ENST00000576359 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
RAB40B-211ENST00000576359 DDX19BQ9UMR2 479 aa17.91■□□□□ 0.46
RAB40B-211ENST00000576359 RGPD8O14715 1765 aaPredicted RBP17.9■□□□□ 0.46
RAB40B-211ENST00000576359 AEBP1Q8IUX7 1158 aa17.9■□□□□ 0.46
RAB40B-211ENST00000576359 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
RAB40B-211ENST00000576359 DIP2AQ14689 1571 aa17.9■□□□□ 0.46
RAB40B-211ENST00000576359 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
RAB40B-211ENST00000576359 VAMP4O75379 141 aa17.9■□□□□ 0.46
RAB40B-211ENST00000576359 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.45
RAB40B-211ENST00000576359 USP31Q70CQ4 1352 aa17.89■□□□□ 0.45
RAB40B-211ENST00000576359 GNAI1P63096 354 aa17.89■□□□□ 0.45
RAB40B-211ENST00000576359 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
RAB40B-211ENST00000576359 USP19O94966 1318 aa17.89■□□□□ 0.45
RAB40B-211ENST00000576359 BRPF1P55201 1214 aaPredicted RBP17.89■□□□□ 0.45
RAB40B-211ENST00000576359 RGPD1P0DJD0 1748 aa17.88■□□□□ 0.45
RAB40B-211ENST00000576359 SEC24BO95487 1268 aa17.88■□□□□ 0.45
RAB40B-211ENST00000576359 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
RAB40B-211ENST00000576359 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
RAB40B-211ENST00000576359 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
RAB40B-211ENST00000576359 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
RAB40B-211ENST00000576359 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
RAB40B-211ENST00000576359 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
RAB40B-211ENST00000576359 HDAC1Q13547 482 aaPredicted RBP17.87■□□□□ 0.45
RAB40B-211ENST00000576359 LMOD3Q0VAK6 560 aa17.86■□□□□ 0.45
RAB40B-211ENST00000576359 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
RAB40B-211ENST00000576359 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
RAB40B-211ENST00000576359 MRPL50Q8N5N7 158 aaKnown RBP17.86■□□□□ 0.45
RAB40B-211ENST00000576359 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
RAB40B-211ENST00000576359 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
RAB40B-211ENST00000576359 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
RAB40B-211ENST00000576359 SOX12O15370 315 aa17.84■□□□□ 0.45
RAB40B-211ENST00000576359 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
RAB40B-211ENST00000576359 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.45
RAB40B-211ENST00000576359 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.45
RAB40B-211ENST00000576359 PIK3C2AO00443 1686 aa17.83■□□□□ 0.44
RAB40B-211ENST00000576359 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
RAB40B-211ENST00000576359 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
RAB40B-211ENST00000576359 CEP170BQ9Y4F5 1589 aaPredicted RBP17.82■□□□□ 0.44
RAB40B-211ENST00000576359 PIK3R4Q99570 1358 aa17.82■□□□□ 0.44
RAB40B-211ENST00000576359 KCNA6P17658 529 aa17.81■□□□□ 0.44
RAB40B-211ENST00000576359 SMC5Q8IY18 1101 aa17.81■□□□□ 0.44
RAB40B-211ENST00000576359 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
RAB40B-211ENST00000576359 ARHGAP45Q92619 1136 aa17.8■□□□□ 0.44
RAB40B-211ENST00000576359 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
RAB40B-211ENST00000576359 ABCC4O15439 1325 aa17.79■□□□□ 0.44
RAB40B-211ENST00000576359 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
RAB40B-211ENST00000576359 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
RAB40B-211ENST00000576359 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
RAB40B-211ENST00000576359 MCM10Q7L590 875 aa17.78■□□□□ 0.44
RAB40B-211ENST00000576359 SBNO1A3KN83 1393 aa17.77■□□□□ 0.44
RAB40B-211ENST00000576359 ARHGEF10O15013 1369 aa17.77■□□□□ 0.44
RAB40B-211ENST00000576359 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
RAB40B-211ENST00000576359 FLT4P35916 1363 aa17.77■□□□□ 0.44
RAB40B-211ENST00000576359 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
RAB40B-211ENST00000576359 CHL1O00533 1208 aa17.75■□□□□ 0.43
RAB40B-211ENST00000576359 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
RAB40B-211ENST00000576359 CRB1P82279 1406 aa17.75■□□□□ 0.43
RAB40B-211ENST00000576359 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
RAB40B-211ENST00000576359 NUCB1Q02818 461 aa17.74■□□□□ 0.43
RAB40B-211ENST00000576359 KDRP35968 1356 aa17.74■□□□□ 0.43
RAB40B-211ENST00000576359 FOXO3O43524 673 aa17.73■□□□□ 0.43
RAB40B-211ENST00000576359 TBC1D32Q96NH3 1257 aa17.73■□□□□ 0.43
RAB40B-211ENST00000576359 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
RAB40B-211ENST00000576359 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
RAB40B-211ENST00000576359 EYA1Q99502 592 aa17.72■□□□□ 0.43
RAB40B-211ENST00000576359 CHD2O14647 1828 aaKnown RBP17.72■□□□□ 0.43
RAB40B-211ENST00000576359 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
RAB40B-211ENST00000576359 NLRP6P59044 892 aa17.72■□□□□ 0.43
RAB40B-211ENST00000576359 BECN1Q14457 450 aa17.72■□□□□ 0.43
RAB40B-211ENST00000576359 AMPHP49418 695 aa17.71■□□□□ 0.43
RAB40B-211ENST00000576359 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
RAB40B-211ENST00000576359 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms