RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 NPATQ14207 1427 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 ABTB2Q8N961 1025 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPAIN-215ENST00000575112 DDX54Q8TDD1 881 aaKnown RBP10.54□□□□□ -0.72
RPAIN-215ENST00000575112 PLXNC1O60486 1568 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 PTPRTO14522 1441 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 YEATS2Q9ULM3 1422 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-215ENST00000575112 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
RPAIN-215ENST00000575112 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-215ENST00000575112 IL1RAPL2Q9NP60 686 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
RPAIN-215ENST00000575112 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
RPAIN-215ENST00000575112 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-215ENST00000575112 ABCA6Q8N139 1617 aa10.52□□□□□ -0.72
RPAIN-215ENST00000575112 SMC5Q8IY18 1101 aa10.52□□□□□ -0.72
RPAIN-215ENST00000575112 CHD1O14646 1710 aa10.52□□□□□ -0.73
RPAIN-215ENST00000575112 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
RPAIN-215ENST00000575112 FCHSD2O94868 740 aa10.52□□□□□ -0.73
RPAIN-215ENST00000575112 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
RPAIN-215ENST00000575112 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
RPAIN-215ENST00000575112 SIRT2Q8IXJ6 389 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
RPAIN-215ENST00000575112 NINLQ9Y2I6 1382 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 RPGRIP1LQ68CZ1 1315 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 NCOA3Q9Y6Q9 1424 aa10.51□□□□□ -0.73
RPAIN-215ENST00000575112 CSB-PGBD3P0DP91 1061 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 RBM25P49756 843 aaKnown RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 NUCB1Q02818 461 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 MCTP1Q6DN14 999 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 DDX49Q9Y6V7 483 aaKnown RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 ESCO1Q5FWF5 840 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 CAVIN1Q6NZI2 390 aaKnown RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 FAM13BQ9NYF5 915 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 ZNF518AQ6AHZ1 1483 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 ANP32BQ92688 251 aaKnown RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 PLEKHF1Q96S99 279 aa10.5□□□□□ -0.73
RPAIN-215ENST00000575112 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
RPAIN-215ENST00000575112 KCNJ4P48050 445 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 ZGPATQ8N5A5 531 aaKnown RBP10.49□□□□□ -0.73
RPAIN-215ENST00000575112 R3HCC1Q9Y3T6 440 aaKnown RBP10.49□□□□□ -0.73
RPAIN-215ENST00000575112 ACEP12821 1306 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 PSME1Q06323 249 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 MEIS3Q99687 375 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 AMOTL2Q9Y2J4 779 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 TRPM2O94759 1503 aa10.49□□□□□ -0.73
RPAIN-215ENST00000575112 VAMP4O75379 141 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 G2E3Q7L622 706 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 TSC1Q92574 1164 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 RBSNQ9H1K0 784 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
RPAIN-215ENST00000575112 CHMP3Q9Y3E7 222 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 ANKRD36BQ8N2N9 1353 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 BAG4O95429 457 aaKnown RBP10.48□□□□□ -0.73
RPAIN-215ENST00000575112 GSPT1P15170 499 aaKnown RBP10.48□□□□□ -0.73
RPAIN-215ENST00000575112 PIP4K2AP48426 406 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-215ENST00000575112 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
RPAIN-215ENST00000575112 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
RPAIN-215ENST00000575112 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
RPAIN-215ENST00000575112 MROH2AA6NES4 1674 aa10.47□□□□□ -0.73
RPAIN-215ENST00000575112 API5Q9BZZ5 524 aaKnown RBP10.47□□□□□ -0.73
RPAIN-215ENST00000575112 K7ELQ4 463 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-215ENST00000575112 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
RPAIN-215ENST00000575112 LMOD3Q0VAK6 560 aa10.47□□□□□ -0.73
RPAIN-215ENST00000575112 EIF4A2Q14240 407 aaKnown RBP10.47□□□□□ -0.73
RPAIN-215ENST00000575112 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
RPAIN-215ENST00000575112 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.73
RPAIN-215ENST00000575112 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
RPAIN-215ENST00000575112 FAM177BA6PVY3 158 aa10.46□□□□□ -0.73
RPAIN-215ENST00000575112 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.73
RPAIN-215ENST00000575112 PRDM10Q9NQV6 1147 aa10.46□□□□□ -0.73
RPAIN-215ENST00000575112 CCDC27Q2M243 656 aa10.46□□□□□ -0.74
RPAIN-215ENST00000575112 SNX21Q969T3 373 aa10.46□□□□□ -0.74
RPAIN-215ENST00000575112 GBP4Q96PP9 640 aa10.46□□□□□ -0.74
RPAIN-215ENST00000575112 MAP3K4Q9Y6R4 1608 aa10.45□□□□□ -0.74
RPAIN-215ENST00000575112 TEFQ10587 303 aa10.45□□□□□ -0.74
RPAIN-215ENST00000575112 ZBTB7BO15156 539 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-215ENST00000575112 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
RPAIN-215ENST00000575112 SURF6O75683 361 aaKnown RBP10.45□□□□□ -0.74
RPAIN-215ENST00000575112 ZSCAN23Q3MJ62 389 aa10.45□□□□□ -0.74
RPAIN-215ENST00000575112 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
RPAIN-215ENST00000575112 GPT2Q8TD30 523 aa10.45□□□□□ -0.74
RPAIN-215ENST00000575112 SIL1Q9H173 461 aa10.44□□□□□ -0.74
RPAIN-215ENST00000575112 ZCCHC11Q5TAX3 1644 aaKnown RBP10.44□□□□□ -0.74
RPAIN-215ENST00000575112 NEK4P51957 841 aa10.44□□□□□ -0.74
RPAIN-215ENST00000575112 LTKP29376 864 aa10.44□□□□□ -0.74
RPAIN-215ENST00000575112 FOSBP53539 338 aa10.44□□□□□ -0.74
RPAIN-215ENST00000575112 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
RPAIN-215ENST00000575112 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms