RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 ESCO1Q5FWF5 840 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 ZNF579Q8NAF0 562 aaKnown RBP8.06□□□□□ -1.12
TRIM25-208ENST00000574234 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 ROBO2Q9HCK4 1378 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 KNDC1Q76NI1 1749 aa8.06□□□□□ -1.12
TRIM25-208ENST00000574234 TNS3Q68CZ2 1445 aa8.05□□□□□ -1.12
TRIM25-208ENST00000574234 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
TRIM25-208ENST00000574234 AK7Q96M32 723 aa8.05□□□□□ -1.12
TRIM25-208ENST00000574234 GOLGB1Q14789 3259 aaKnown RBP8.05□□□□□ -1.12
TRIM25-208ENST00000574234 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
TRIM25-208ENST00000574234 SOX12O15370 315 aa8.04□□□□□ -1.12
TRIM25-208ENST00000574234 APBA3O96018 575 aa8.04□□□□□ -1.12
TRIM25-208ENST00000574234 FAM182BQ5T319 152 aa8.04□□□□□ -1.12
TRIM25-208ENST00000574234 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
TRIM25-208ENST00000574234 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
TRIM25-208ENST00000574234 TRPM3Q9HCF6 1732 aaPredicted RBP8.03□□□□□ -1.12
TRIM25-208ENST00000574234 PPLO60437 1756 aa8.03□□□□□ -1.12
TRIM25-208ENST00000574234 TRIM37O94972 964 aa8.03□□□□□ -1.12
TRIM25-208ENST00000574234 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
TRIM25-208ENST00000574234 MFSD10Q14728 455 aa8.03□□□□□ -1.12
TRIM25-208ENST00000574234 EFCAB3Q8N7B9 438 aa8.03□□□□□ -1.12
TRIM25-208ENST00000574234 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
TRIM25-208ENST00000574234 LARP6Q9BRS8 491 aaKnown RBP8.02□□□□□ -1.13
TRIM25-208ENST00000574234 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
TRIM25-208ENST00000574234 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
TRIM25-208ENST00000574234 COL24A1Q17RW2 1714 aa8.02□□□□□ -1.13
TRIM25-208ENST00000574234 SPATA31A5Q5VU36 1347 aa8.02□□□□□ -1.13
TRIM25-208ENST00000574234 SPATA31A7Q8IWB4 1347 aa8.02□□□□□ -1.13
TRIM25-208ENST00000574234 PEAK1Q9H792 1746 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 MAP3K5Q99683 1374 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 CLTCL1P53675 1640 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 FAM83GA6ND36 823 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 SLC34A2O95436 690 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 PDE4AP27815 886 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 SYT17Q9BSW7 474 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 CCDC61Q9Y6R9 512 aa8.01□□□□□ -1.13
TRIM25-208ENST00000574234 SBNO1A3KN83 1393 aa8□□□□□ -1.13
TRIM25-208ENST00000574234 PITPNM1O00562 1244 aa8□□□□□ -1.13
TRIM25-208ENST00000574234 PTGER2P43116 358 aa8□□□□□ -1.13
TRIM25-208ENST00000574234 NAIPQ13075 1403 aa8□□□□□ -1.13
TRIM25-208ENST00000574234 HSPA6P17066 643 aa7.99□□□□□ -1.13
TRIM25-208ENST00000574234 CAMK2BQ13554 666 aa7.99□□□□□ -1.13
TRIM25-208ENST00000574234 BTG4Q9NY30 223 aa7.99□□□□□ -1.13
TRIM25-208ENST00000574234 NRXN1Q9ULB1 1477 aa7.99□□□□□ -1.13
TRIM25-208ENST00000574234 QSER1Q2KHR3 1735 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 AKAP12Q02952 1782 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 PSME1Q06323 249 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 KRT28Q7Z3Y7 464 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
TRIM25-208ENST00000574234 CRISPLD2Q9H0B8 497 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 CABP2Q9NPB3 220 aa7.98□□□□□ -1.13
TRIM25-208ENST00000574234 PHRF1Q9P1Y6 1649 aaKnown RBP7.98□□□□□ -1.13
TRIM25-208ENST00000574234 TECPR2O15040 1411 aa7.97□□□□□ -1.13
TRIM25-208ENST00000574234 ZNF326Q5BKZ1 582 aaKnown RBP7.97□□□□□ -1.13
TRIM25-208ENST00000574234 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
TRIM25-208ENST00000574234 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
TRIM25-208ENST00000574234 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
TRIM25-208ENST00000574234 WNK3Q9BYP7 1800 aa7.96□□□□□ -1.13
TRIM25-208ENST00000574234 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 TRIM66O15016 1216 aa7.96□□□□□ -1.14
TRIM25-208ENST00000574234 PLSCR1O15162 318 aa7.96□□□□□ -1.14
TRIM25-208ENST00000574234 CACNB1Q02641 598 aaPredicted RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 TRIM26Q12899 539 aaPredicted RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 CHADLQ6NUI6 762 aa7.96□□□□□ -1.14
TRIM25-208ENST00000574234 IFNL1Q8IU54 200 aa7.96□□□□□ -1.14
TRIM25-208ENST00000574234 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 DDX27Q96GQ7 796 aaKnown RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.14
TRIM25-208ENST00000574234 SPATA31A1Q5TZJ5 1347 aa7.96□□□□□ -1.14
TRIM25-208ENST00000574234 TOPAZ1Q8N9V7 1692 aa7.95□□□□□ -1.14
TRIM25-208ENST00000574234 VPS8Q8N3P4 1428 aa7.95□□□□□ -1.14
TRIM25-208ENST00000574234 GPIHBP1Q8IV16 184 aa7.95□□□□□ -1.14
TRIM25-208ENST00000574234 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
TRIM25-208ENST00000574234 ZBTB7AO95365 584 aa7.94□□□□□ -1.14
TRIM25-208ENST00000574234 MLLT3P42568 568 aaPredicted RBP7.94□□□□□ -1.14
TRIM25-208ENST00000574234 PRELPP51888 382 aa7.94□□□□□ -1.14
TRIM25-208ENST00000574234 PDE4DQ08499 809 aa7.94□□□□□ -1.14
TRIM25-208ENST00000574234 KANK4Q5T7N3 995 aaPredicted RBP7.94□□□□□ -1.14
TRIM25-208ENST00000574234 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
TRIM25-208ENST00000574234 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
TRIM25-208ENST00000574234 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
TRIM25-208ENST00000574234 MS4A4AQ96JQ5 239 aa7.93□□□□□ -1.14
TRIM25-208ENST00000574234 PDGFDQ9GZP0 370 aaPredicted RBP7.93□□□□□ -1.14
TRIM25-208ENST00000574234 MTFR1LQ9H019 292 aa7.93□□□□□ -1.14
TRIM25-208ENST00000574234 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 NUTM2FA1L443 756 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 GPR162Q16538 588 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 OVOS2A0A0G2JMS6 1433 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 PAPPAQ13219 1627 aa7.92□□□□□ -1.14
TRIM25-208ENST00000574234 ARHGEF28Q8N1W1 1705 aaKnown RBP7.92□□□□□ -1.14
TRIM25-208ENST00000574234 PCNTO95613 3336 aa7.91□□□□□ -1.14
TRIM25-208ENST00000574234 ATP10DQ9P241 1426 aa7.91□□□□□ -1.14
TRIM25-208ENST00000574234 ITSN1Q15811 1721 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms