RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 GRIPAP1Q4V328 841 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 RSBN1LQ6PCB5 846 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 CNPY4Q8N129 248 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 TMC2Q8TDI7 906 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 PNISRQ8TF01 805 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 SPIRE2Q8WWL2 714 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 PCGF6Q9BYE7 350 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 PCDH12Q9NPG4 1184 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 GABBR1Q9UBS5 961 aa6.67□□□□□ -1.34
TOPBP1-210ENST00000572787 RIMBP2O15034 1052 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 ATP2B4P23634 1241 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 PAX3P23760 479 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 CSPP1Q1MSJ5 1256 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 C4orf46Q504U0 113 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 VARS2Q5ST30 1063 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 METTL3Q86U44 580 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 METTL16Q86W50 562 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 OSBPL2Q9H1P3 480 aa6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 GEMIN8Q9NWZ8 242 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-210ENST00000572787 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 S100BP04271 92 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 BIRC2Q13490 618 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 QPCTQ16769 361 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 C1orf216Q8TAB5 229 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 METTL5Q9NRN9 209 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 SLAIN2Q9P270 581 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 DCTN4Q9UJW0 460 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 BOLA1Q9Y3E2 137 aa6.65□□□□□ -1.34
TOPBP1-210ENST00000572787 FAM196BA6NMK8 535 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 FOXD4Q12950 439 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 WDR78Q5VTH9 848 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 DPY19L2Q6NUT2 758 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 CLEC4GQ6UXB4 293 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 KRBA2Q6ZNG9 492 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 FILIP1Q7Z7B0 1213 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 JAZF1Q86VZ6 243 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 FAM9BQ8IZU0 186 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 TMEM87AQ8NBN3 555 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 RNF34Q969K3 372 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 NPDC1Q9NQX5 325 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 PNMA2Q9UL42 364 aa6.64□□□□□ -1.35
TOPBP1-210ENST00000572787 RHBDL3P58872 404 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 FAM69CQ0P6D2 419 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 PLPP6Q8IY26 295 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 PNMA1Q8ND90 353 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 MTA3Q9BTC8 594 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 TMX1Q9H3N1 280 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 BSDC1Q9NW68 430 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 DDX56Q9NY93 547 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 DMGDHQ9UI17 866 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 COMMD10Q9Y6G5 202 aa6.63□□□□□ -1.35
TOPBP1-210ENST00000572787 PRC1O43663 620 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 DNAJC6O75061 913 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 DNAJA1P31689 397 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 TBX4P57082 545 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 EIF4G2P78344 907 aaKnown RBP eCLIP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 ARID5AQ03989 594 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 BMS1Q14692 1282 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 PRPF38BQ5VTL8 546 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 PPP1R18Q6NYC8 613 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 NFATC2IPQ8NCF5 419 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 RPS6KC1Q96S38 1066 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 SPC25Q9HBM1 224 aa6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 G3BP2Q9UN86 482 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L15C9J2P7 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L10C9JJH3 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L13C9JLJ4 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L12C9JPN9 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L11C9JVI0 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L21D6R901 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L18D6R9N7 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L22D6RA61 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L17D6RBQ6 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L19D6RCP7 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L20D6RJB6 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 H3BRB1 525 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 PPP1R12AO14974 1030 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 ICMTO60725 284 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 WDHD1O75717 1129 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 LIG1P18858 919 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L24Q0WX57 530 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 LARP1Q6PKG0 1096 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 NUTM1Q86Y26 1132 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 GLYCTKQ8IVS8 523 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 RGL4Q8IZJ4 473 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 ZNF687Q8N1G0 1237 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 NLRP7Q8WX94 980 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 MRFAP1L1Q96HT8 127 aa6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 TUT1Q9H6E5 874 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 GNL3LQ9NVN8 582 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L3A6NCW0 530 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms