RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 BMP2KLQ5H9B9 411 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 PDCL3Q9H2J4 239 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
USP43-203ENST00000570827 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
USP43-203ENST00000570827 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 REC8O95072 547 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP43-203ENST00000570827 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
USP43-203ENST00000570827 NME9Q86XW9 330 aa12.15□□□□□ -0.46
USP43-203ENST00000570827 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
USP43-203ENST00000570827 UNC13BO14795 1591 aa12.15□□□□□ -0.46
USP43-203ENST00000570827 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
USP43-203ENST00000570827 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
USP43-203ENST00000570827 KLHL40Q2TBA0 621 aa12.15□□□□□ -0.46
USP43-203ENST00000570827 OTUD7AQ8TE49 926 aaPredicted RBP12.15□□□□□ -0.46
USP43-203ENST00000570827 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
USP43-203ENST00000570827 SHROOM2Q13796 1616 aa12.15□□□□□ -0.47
USP43-203ENST00000570827 CHAF1AQ13111 956 aaPredicted RBP12.15□□□□□ -0.47
USP43-203ENST00000570827 RBSNQ9H1K0 784 aa12.15□□□□□ -0.47
USP43-203ENST00000570827 MAP4K4O95819 1239 aaPredicted RBP12.14□□□□□ -0.47
USP43-203ENST00000570827 POLR3AO14802 1390 aaPredicted RBP12.14□□□□□ -0.47
USP43-203ENST00000570827 GNAI1P63096 354 aa12.14□□□□□ -0.47
USP43-203ENST00000570827 SPC24Q8NBT2 197 aa12.14□□□□□ -0.47
USP43-203ENST00000570827 ATP10AO60312 1499 aa12.14□□□□□ -0.47
USP43-203ENST00000570827 TSC1Q92574 1164 aa12.13□□□□□ -0.47
USP43-203ENST00000570827 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
USP43-203ENST00000570827 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
USP43-203ENST00000570827 ABCC1P33527 1531 aa12.13□□□□□ -0.47
USP43-203ENST00000570827 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
USP43-203ENST00000570827 SNX21Q969T3 373 aa12.13□□□□□ -0.47
USP43-203ENST00000570827 HMMRO75330 724 aa12.12□□□□□ -0.47
USP43-203ENST00000570827 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
USP43-203ENST00000570827 FIBPO43427 364 aa12.12□□□□□ -0.47
USP43-203ENST00000570827 MCM10Q7L590 875 aa12.12□□□□□ -0.47
USP43-203ENST00000570827 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
USP43-203ENST00000570827 CT47B1P0C2W7 299 aaPredicted RBP12.12□□□□□ -0.47
USP43-203ENST00000570827 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
USP43-203ENST00000570827 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
USP43-203ENST00000570827 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
USP43-203ENST00000570827 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 CBX1P83916 185 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 DDX54Q8TDD1 881 aaKnown RBP12.11□□□□□ -0.47
USP43-203ENST00000570827 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
USP43-203ENST00000570827 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
USP43-203ENST00000570827 F6X3S4 739 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 SULT6B1Q6IMI4 303 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 PLXNC1O60486 1568 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
USP43-203ENST00000570827 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
USP43-203ENST00000570827 OFD1O75665 1012 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 C17orf53Q8N3J3 647 aaPredicted RBP12.1□□□□□ -0.47
USP43-203ENST00000570827 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
USP43-203ENST00000570827 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 SDSP20132 328 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 IGSF3O75054 1194 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 COG3Q96JB2 828 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 ERC2O15083 957 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 FYB1O15117 783 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 STK31Q9BXU1 1019 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 MBIPQ9NS73 344 aa12.09□□□□□ -0.47
USP43-203ENST00000570827 UHRF1BP1LA0JNW5 1464 aa12.08□□□□□ -0.48
USP43-203ENST00000570827 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
USP43-203ENST00000570827 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
USP43-203ENST00000570827 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
USP43-203ENST00000570827 PHF14O94880 888 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 AMPHP49418 695 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
USP43-203ENST00000570827 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 ZFYVE16Q7Z3T8 1539 aa12.07□□□□□ -0.48
USP43-203ENST00000570827 MBD3O95983 291 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
USP43-203ENST00000570827 FCHSD2O94868 740 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 TTC22Q5TAA0 569 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
USP43-203ENST00000570827 VAMP4O75379 141 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 USHBP1Q8N6Y0 703 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 MEIS3Q99687 375 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
USP43-203ENST00000570827 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
USP43-203ENST00000570827 FGD1P98174 961 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
USP43-203ENST00000570827 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
USP43-203ENST00000570827 GSPT1P15170 499 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms