RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
TCF4-245ENST00000570177 MST1RQ04912 1400 aa12.92□□□□□ -0.34
TCF4-245ENST00000570177 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
TCF4-245ENST00000570177 NLRP6P59044 892 aa12.91□□□□□ -0.34
TCF4-245ENST00000570177 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
TCF4-245ENST00000570177 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
TCF4-245ENST00000570177 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
TCF4-245ENST00000570177 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
TCF4-245ENST00000570177 DCCP43146 1447 aa12.9□□□□□ -0.34
TCF4-245ENST00000570177 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
TCF4-245ENST00000570177 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
TCF4-245ENST00000570177 FOXO3O43524 673 aa12.9□□□□□ -0.34
TCF4-245ENST00000570177 PDE4CQ08493 712 aa12.9□□□□□ -0.34
TCF4-245ENST00000570177 NUTM2GQ5VZR2 741 aa12.9□□□□□ -0.34
TCF4-245ENST00000570177 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
TCF4-245ENST00000570177 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
TCF4-245ENST00000570177 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
TCF4-245ENST00000570177 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
TCF4-245ENST00000570177 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
TCF4-245ENST00000570177 E9PSI1 815 aa12.88□□□□□ -0.35
TCF4-245ENST00000570177 HMOX1P09601 288 aa12.88□□□□□ -0.35
TCF4-245ENST00000570177 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
TCF4-245ENST00000570177 PSME1Q06323 249 aa12.88□□□□□ -0.35
TCF4-245ENST00000570177 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
TCF4-245ENST00000570177 SOX12O15370 315 aa12.87□□□□□ -0.35
TCF4-245ENST00000570177 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
TCF4-245ENST00000570177 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
TCF4-245ENST00000570177 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
TCF4-245ENST00000570177 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
TCF4-245ENST00000570177 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
TCF4-245ENST00000570177 RGPD1P0DJD0 1748 aa12.87□□□□□ -0.35
TCF4-245ENST00000570177 NFAT5O94916 1531 aa12.87□□□□□ -0.35
TCF4-245ENST00000570177 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
TCF4-245ENST00000570177 ATF3P18847 181 aa12.86□□□□□ -0.35
TCF4-245ENST00000570177 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
TCF4-245ENST00000570177 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
TCF4-245ENST00000570177 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
TCF4-245ENST00000570177 FLT4P35916 1363 aa12.85□□□□□ -0.35
TCF4-245ENST00000570177 HOXC9P31274 260 aa12.85□□□□□ -0.35
TCF4-245ENST00000570177 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
TCF4-245ENST00000570177 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
TCF4-245ENST00000570177 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
TCF4-245ENST00000570177 RIPK4P57078 832 aa12.84□□□□□ -0.35
TCF4-245ENST00000570177 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
TCF4-245ENST00000570177 USP19O94966 1318 aa12.84□□□□□ -0.35
TCF4-245ENST00000570177 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
TCF4-245ENST00000570177 FGD1P98174 961 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 SLIT3O75094 1523 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 MSH6P52701 1360 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
TCF4-245ENST00000570177 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
TCF4-245ENST00000570177 AMPHP49418 695 aa12.82□□□□□ -0.36
TCF4-245ENST00000570177 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
TCF4-245ENST00000570177 EYA1Q99502 592 aa12.82□□□□□ -0.36
TCF4-245ENST00000570177 KDRP35968 1356 aa12.81□□□□□ -0.36
TCF4-245ENST00000570177 PLIN1O60240 522 aa12.81□□□□□ -0.36
TCF4-245ENST00000570177 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
TCF4-245ENST00000570177 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
TCF4-245ENST00000570177 IL16Q14005 1332 aa12.81□□□□□ -0.36
TCF4-245ENST00000570177 GCP02774 474 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 IP6K1Q92551 441 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
TCF4-245ENST00000570177 PXDNQ92626 1479 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
TCF4-245ENST00000570177 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
TCF4-245ENST00000570177 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
TCF4-245ENST00000570177 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
TCF4-245ENST00000570177 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
TCF4-245ENST00000570177 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
TCF4-245ENST00000570177 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
TCF4-245ENST00000570177 BCAR3O75815 825 aa12.78□□□□□ -0.36
TCF4-245ENST00000570177 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
TCF4-245ENST00000570177 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
TCF4-245ENST00000570177 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
TCF4-245ENST00000570177 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.36
TCF4-245ENST00000570177 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
TCF4-245ENST00000570177 LTN1O94822 1766 aa12.77□□□□□ -0.37
TCF4-245ENST00000570177 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
TCF4-245ENST00000570177 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
TCF4-245ENST00000570177 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
TCF4-245ENST00000570177 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
TCF4-245ENST00000570177 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
TCF4-245ENST00000570177 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
TCF4-245ENST00000570177 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
TCF4-245ENST00000570177 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
TCF4-245ENST00000570177 NCAPD2Q15021 1401 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms