RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 FAM196BA6NMK8 535 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 SLC10A3P09131 477 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 CDK11BP21127 795 aaKnown RBP4.85□□□□□ -1.63
CNOT1-221ENST00000569924 NR1H3Q13133 447 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 GRIPAP1Q4V328 841 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 NOM1Q5C9Z4 860 aaKnown RBP4.85□□□□□ -1.63
CNOT1-221ENST00000569924 PLEKHM2Q8IWE5 1019 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 BCL2L13Q9BXK5 485 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 CDK11AQ9UQ88 783 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-221ENST00000569924 PTPRMP28827 1452 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 RAPGEF6Q8TEU7 1601 aa4.85□□□□□ -1.63
CNOT1-221ENST00000569924 USP17L3A6NCW0 530 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 USP17L4A6NCW7 530 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 PTPREP23469 700 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 MARSP56192 900 aaKnown RBP4.84□□□□□ -1.63
CNOT1-221ENST00000569924 ARSIQ5FYB1 569 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 PPP4R3BQ5MIZ7 849 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 USP17L2Q6R6M4 530 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 USP17L1Q7RTZ2 530 aa4.84□□□□□ -1.63
CNOT1-221ENST00000569924 KHSRPQ92945 711 aaKnown RBP eCLIP4.84□□□□□ -1.63
CNOT1-221ENST00000569924 CLP1Q92989 425 aaKnown RBP4.84□□□□□ -1.63
CNOT1-221ENST00000569924 CDCA7Q9BWT1 371 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-221ENST00000569924 BCORL1Q5H9F3 1711 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 FRMPD1Q5SYB0 1578 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 NUP153P49790 1475 aaKnown RBP4.83□□□□□ -1.64
CNOT1-221ENST00000569924 EEA1Q15075 1411 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 PSDA5PKW4 1024 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L15C9J2P7 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L10C9JJH3 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L13C9JLJ4 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L12C9JPN9 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L11C9JVI0 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L21D6R901 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L18D6R9N7 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L22D6RA61 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L17D6RBQ6 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L19D6RCP7 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L20D6RJB6 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 SMAPO00193 183 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 PIK3CDO00329 1044 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 PER1O15534 1290 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-221ENST00000569924 RAPGEF3O95398 923 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 SKIP12755 728 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 TCF3P15923 654 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L24Q0WX57 530 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 FAM200AQ8TCP9 573 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
CNOT1-221ENST00000569924 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 FHOD3Q2V2M9 1422 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 ZBBXA8MT70 800 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 USP17L5A8MUK1 530 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 FBXO45P0C2W1 286 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 DOK7Q18PE1 504 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 CRTC2Q53ET0 693 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-221ENST00000569924 DESI1Q6ICB0 168 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 LARP1Q6PKG0 1096 aaKnown RBP4.82□□□□□ -1.64
CNOT1-221ENST00000569924 FAM177A1Q8N128 213 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-221ENST00000569924 GIPC2Q8TF65 315 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 ZSWIM6Q9HCJ5 1215 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 MKRN1Q9UHC7 482 aaKnown RBP4.82□□□□□ -1.64
CNOT1-221ENST00000569924 MADDQ8WXG6 1647 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 PCF11O94913 1555 aaKnown RBP4.82□□□□□ -1.64
CNOT1-221ENST00000569924 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
CNOT1-221ENST00000569924 DENND4BO75064 1496 aaPredicted RBP4.81□□□□□ -1.64
CNOT1-221ENST00000569924 AKNAQ7Z591 1439 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 RICTORQ6R327 1708 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 ARID4BQ4LE39 1312 aaPredicted RBP4.81□□□□□ -1.64
CNOT1-221ENST00000569924 PLEKHD1A6NEE1 506 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 ATP2B4P23634 1241 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 VAMP1P23763 118 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 FUT2Q10981 343 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 PTK7Q13308 1070 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 ZNF326Q5BKZ1 582 aaKnown RBP4.81□□□□□ -1.64
CNOT1-221ENST00000569924 SWT1Q5T5J6 900 aaKnown RBP4.81□□□□□ -1.64
CNOT1-221ENST00000569924 GPR153Q6NV75 609 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 SYMPKQ92797 1274 aaKnown RBP4.81□□□□□ -1.64
CNOT1-221ENST00000569924 DRC1Q96MC2 740 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 C8orf37Q96NL8 207 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 DCBLD2Q96PD2 775 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 METRNQ9UJH8 293 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 LHX6Q9UPM6 363 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 EFCAB5A4FU69 1503 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 ZMYM4Q5VZL5 1548 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 MAGI2Q86UL8 1455 aa4.81□□□□□ -1.64
CNOT1-221ENST00000569924 POGZQ7Z3K3 1410 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 ANKRD33BA6NCL7 494 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 ATP5J2-PTCD1G3V325 749 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 LZTS3O60299 673 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-221ENST00000569924 RASA1P20936 1047 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 ATP6V1AP38606 617 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 SERPINB4P48594 390 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 SWI5Q1ZZU3 235 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 LYPD8Q6UX82 237 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 RETREG3Q86VR2 466 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 CCDC125Q86Z20 511 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 NPAS4Q8IUM7 802 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 DEPDC4Q8N2C3 294 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 C1orf216Q8TAB5 229 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 FAM174AQ8TBP5 190 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms