RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
SPG7-222ENST00000569820 NPHP4O75161 1426 aaPredicted RBP15.3■□□□□ 0.04
SPG7-222ENST00000569820 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
SPG7-222ENST00000569820 DIAPH1O60610 1272 aaKnown RBP15.29■□□□□ 0.04
SPG7-222ENST00000569820 COG3Q96JB2 828 aa15.29■□□□□ 0.04
SPG7-222ENST00000569820 RRP7AQ9Y3A4 280 aaKnown RBP15.29■□□□□ 0.04
SPG7-222ENST00000569820 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
SPG7-222ENST00000569820 E9PSI1 815 aa15.28■□□□□ 0.04
SPG7-222ENST00000569820 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
SPG7-222ENST00000569820 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
SPG7-222ENST00000569820 RRAGDQ9NQL2 400 aaPredicted RBP15.28■□□□□ 0.04
SPG7-222ENST00000569820 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
SPG7-222ENST00000569820 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
SPG7-222ENST00000569820 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
SPG7-222ENST00000569820 PIK3C2AO00443 1686 aa15.27■□□□□ 0.04
SPG7-222ENST00000569820 CCDC27Q2M243 656 aa15.27■□□□□ 0.04
SPG7-222ENST00000569820 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
SPG7-222ENST00000569820 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
SPG7-222ENST00000569820 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
SPG7-222ENST00000569820 MARF1Q9Y4F3 1742 aaKnown RBP15.26■□□□□ 0.03
SPG7-222ENST00000569820 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
SPG7-222ENST00000569820 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
SPG7-222ENST00000569820 RGS3P49796 1198 aa15.25■□□□□ 0.03
SPG7-222ENST00000569820 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
SPG7-222ENST00000569820 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
SPG7-222ENST00000569820 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
SPG7-222ENST00000569820 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
SPG7-222ENST00000569820 WDR63Q8IWG1 891 aa15.23■□□□□ 0.03
SPG7-222ENST00000569820 VIRMAQ69YN4 1812 aaKnown RBP15.23■□□□□ 0.03
SPG7-222ENST00000569820 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
SPG7-222ENST00000569820 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
SPG7-222ENST00000569820 IL13P35225 146 aa15.22■□□□□ 0.03
SPG7-222ENST00000569820 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
SPG7-222ENST00000569820 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
SPG7-222ENST00000569820 TMPOP42166 694 aaKnown RBP15.21■□□□□ 0.03
SPG7-222ENST00000569820 RGPD1P0DJD0 1748 aa15.21■□□□□ 0.03
SPG7-222ENST00000569820 FCHSD2O94868 740 aa15.21■□□□□ 0.02
SPG7-222ENST00000569820 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.02
SPG7-222ENST00000569820 BECN1Q14457 450 aa15.2■□□□□ 0.02
SPG7-222ENST00000569820 NAP1L5Q96NT1 182 aaPredicted RBP15.2■□□□□ 0.02
SPG7-222ENST00000569820 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
SPG7-222ENST00000569820 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
SPG7-222ENST00000569820 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
SPG7-222ENST00000569820 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
SPG7-222ENST00000569820 PRKAR2BP31323 418 aa15.18■□□□□ 0.02
SPG7-222ENST00000569820 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
SPG7-222ENST00000569820 USP19O94966 1318 aa15.17■□□□□ 0.02
SPG7-222ENST00000569820 HMOX1P09601 288 aa15.16■□□□□ 0.02
SPG7-222ENST00000569820 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
SPG7-222ENST00000569820 BCAR3O75815 825 aa15.15■□□□□ 0.02
SPG7-222ENST00000569820 CLCN1P35523 988 aa15.15■□□□□ 0.02
SPG7-222ENST00000569820 RIPK4P57078 832 aa15.15■□□□□ 0.02
SPG7-222ENST00000569820 MYH16Q9H6N6 1097 aa15.15■□□□□ 0.02
SPG7-222ENST00000569820 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
SPG7-222ENST00000569820 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
SPG7-222ENST00000569820 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
SPG7-222ENST00000569820 PHF8Q9UPP1 1060 aa15.14■□□□□ 0.01
SPG7-222ENST00000569820 IL16Q14005 1332 aa15.14■□□□□ 0.01
SPG7-222ENST00000569820 GOLGA6L3A6NEY3 463 aa15.14■□□□□ 0.01
SPG7-222ENST00000569820 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
SPG7-222ENST00000569820 ARXQ96QS3 562 aa15.13■□□□□ 0.01
SPG7-222ENST00000569820 SBNO1A3KN83 1393 aa15.13■□□□□ 0.01
SPG7-222ENST00000569820 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPG7-222ENST00000569820 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
SPG7-222ENST00000569820 LTN1O94822 1766 aa15.12■□□□□ 0.01
SPG7-222ENST00000569820 FLT4P35916 1363 aa15.12■□□□□ 0.01
SPG7-222ENST00000569820 SOX12O15370 315 aa15.11■□□□□ 0.01
SPG7-222ENST00000569820 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
SPG7-222ENST00000569820 ANTXR1Q9H6X2 564 aa15.11■□□□□ 0.01
SPG7-222ENST00000569820 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
SPG7-222ENST00000569820 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
SPG7-222ENST00000569820 NLRP6P59044 892 aa15.1■□□□□ 0.01
SPG7-222ENST00000569820 KIF1AQ12756 1690 aa15.1■□□□□ 0.01
SPG7-222ENST00000569820 PRDM4Q9UKN5 801 aa15.1■□□□□ 0.01
SPG7-222ENST00000569820 TRPM3Q9HCF6 1732 aaPredicted RBP15.1■□□□□ 0.01
SPG7-222ENST00000569820 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
SPG7-222ENST00000569820 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
SPG7-222ENST00000569820 SEC24BO95487 1268 aa15.09■□□□□ 0.01
SPG7-222ENST00000569820 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
SPG7-222ENST00000569820 NFAT5O94916 1531 aa15.09■□□□□ 0.01
SPG7-222ENST00000569820 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
SPG7-222ENST00000569820 ARHGEF10O15013 1369 aa15.08■□□□□ 0
SPG7-222ENST00000569820 NUTM2GQ5VZR2 741 aa15.08■□□□□ 0
SPG7-222ENST00000569820 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
SPG7-222ENST00000569820 ABTB2Q8N961 1025 aa15.08■□□□□ 0
SPG7-222ENST00000569820 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
SPG7-222ENST00000569820 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
SPG7-222ENST00000569820 PANK2Q9BZ23 570 aa15.08■□□□□ 0
SPG7-222ENST00000569820 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
SPG7-222ENST00000569820 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
SPG7-222ENST00000569820 SULT6B1Q6IMI4 303 aa15.07■□□□□ 0
SPG7-222ENST00000569820 LMTK3Q96Q04 1460 aa15.07■□□□□ 0
SPG7-222ENST00000569820 STRCQ7RTU9 1775 aa15.07■□□□□ 0
SPG7-222ENST00000569820 IGHDP01880 384 aa15.06■□□□□ 0
SPG7-222ENST00000569820 EXOSC9Q06265 439 aaKnown RBP15.06■□□□□ 0
SPG7-222ENST00000569820 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
SPG7-222ENST00000569820 ORAI2Q96SN7 254 aa15.06■□□□□ 0
SPG7-222ENST00000569820 PDCL3Q9H2J4 239 aa15.06■□□□□ 0
SPG7-222ENST00000569820 KDRP35968 1356 aa15.06■□□□□ 0
SPG7-222ENST00000569820 C1orf167Q5SNV9 1468 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms