RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 NGEFQ8N5V2 710 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
PDXDC1-216ENST00000569715 AEBP1Q8IUX7 1158 aa14.37□□□□□ -0.11
PDXDC1-216ENST00000569715 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
PDXDC1-216ENST00000569715 AMPHP49418 695 aa14.36□□□□□ -0.11
PDXDC1-216ENST00000569715 LMOD2Q6P5Q4 547 aa14.36□□□□□ -0.11
PDXDC1-216ENST00000569715 TRMT2AQ8IZ69 625 aaKnown RBP14.36□□□□□ -0.11
PDXDC1-216ENST00000569715 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
PDXDC1-216ENST00000569715 RNF123Q5XPI4 1314 aa14.36□□□□□ -0.11
PDXDC1-216ENST00000569715 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
PDXDC1-216ENST00000569715 SLIT3O75094 1523 aa14.35□□□□□ -0.11
PDXDC1-216ENST00000569715 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
PDXDC1-216ENST00000569715 HOXC9P31274 260 aa14.34□□□□□ -0.11
PDXDC1-216ENST00000569715 DLG5Q8TDM6 1919 aa14.34□□□□□ -0.11
PDXDC1-216ENST00000569715 E9PSI1 815 aa14.34□□□□□ -0.11
PDXDC1-216ENST00000569715 PXDNQ92626 1479 aa14.34□□□□□ -0.11
PDXDC1-216ENST00000569715 SULT6B1Q6IMI4 303 aa14.33□□□□□ -0.11
PDXDC1-216ENST00000569715 BRINP3Q76B58 766 aa14.33□□□□□ -0.11
PDXDC1-216ENST00000569715 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.12
PDXDC1-216ENST00000569715 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
PDXDC1-216ENST00000569715 RIPK4P57078 832 aa14.33□□□□□ -0.12
PDXDC1-216ENST00000569715 USP19O94966 1318 aa14.33□□□□□ -0.12
PDXDC1-216ENST00000569715 NPHP3Q7Z494 1330 aa14.32□□□□□ -0.12
PDXDC1-216ENST00000569715 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
PDXDC1-216ENST00000569715 WDR63Q8IWG1 891 aa14.32□□□□□ -0.12
PDXDC1-216ENST00000569715 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
PDXDC1-216ENST00000569715 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
PDXDC1-216ENST00000569715 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 GCP02774 474 aa14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 SLAIN2Q9P270 581 aa14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 RTL1A6NKG5 1358 aa14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 ARHGEF10O15013 1369 aa14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
PDXDC1-216ENST00000569715 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
PDXDC1-216ENST00000569715 EYA1Q99502 592 aa14.3□□□□□ -0.12
PDXDC1-216ENST00000569715 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
PDXDC1-216ENST00000569715 TNS3Q68CZ2 1445 aa14.3□□□□□ -0.12
PDXDC1-216ENST00000569715 RGPD2P0DJD1 1756 aa14.3□□□□□ -0.12
PDXDC1-216ENST00000569715 IGSF1Q8N6C5 1336 aa14.29□□□□□ -0.12
PDXDC1-216ENST00000569715 NEFMP07197 916 aa14.29□□□□□ -0.12
PDXDC1-216ENST00000569715 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
PDXDC1-216ENST00000569715 IP6K1Q92551 441 aa14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 RGPD5Q99666 1765 aa14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 THUMPD2Q9BTF0 503 aaKnown RBP14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 KDRP35968 1356 aa14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 PLIN1O60240 522 aa14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 ARHGEF25Q86VW2 580 aa14.28□□□□□ -0.12
PDXDC1-216ENST00000569715 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
PDXDC1-216ENST00000569715 LTBP4Q8N2S1 1624 aa14.27□□□□□ -0.12
PDXDC1-216ENST00000569715 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.13
PDXDC1-216ENST00000569715 SPATA31A3Q5VYP0 1347 aa14.27□□□□□ -0.13
PDXDC1-216ENST00000569715 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
PDXDC1-216ENST00000569715 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
PDXDC1-216ENST00000569715 FAM83GA6ND36 823 aa14.26□□□□□ -0.13
PDXDC1-216ENST00000569715 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
PDXDC1-216ENST00000569715 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
PDXDC1-216ENST00000569715 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
PDXDC1-216ENST00000569715 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
PDXDC1-216ENST00000569715 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
PDXDC1-216ENST00000569715 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
PDXDC1-216ENST00000569715 LRRC59Q96AG4 307 aaKnown RBP14.23□□□□□ -0.13
PDXDC1-216ENST00000569715 IL16Q14005 1332 aa14.23□□□□□ -0.13
PDXDC1-216ENST00000569715 BCAR3O75815 825 aa14.23□□□□□ -0.13
PDXDC1-216ENST00000569715 NBPF6Q5VWK0 638 aa14.23□□□□□ -0.13
PDXDC1-216ENST00000569715 NBPF4Q96M43 638 aa14.23□□□□□ -0.13
PDXDC1-216ENST00000569715 COL18A1P39060 1754 aa14.22□□□□□ -0.13
PDXDC1-216ENST00000569715 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
PDXDC1-216ENST00000569715 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
PDXDC1-216ENST00000569715 ERICH6BQ5W0A0 696 aa14.22□□□□□ -0.13
PDXDC1-216ENST00000569715 ABCA3Q99758 1704 aa14.21□□□□□ -0.13
PDXDC1-216ENST00000569715 ROBO1Q9Y6N7 1651 aa14.21□□□□□ -0.13
PDXDC1-216ENST00000569715 LAS1LQ9Y4W2 734 aaKnown RBP14.21□□□□□ -0.13
PDXDC1-216ENST00000569715 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.14
PDXDC1-216ENST00000569715 ANKRD24Q8TF21 1146 aa14.21□□□□□ -0.14
PDXDC1-216ENST00000569715 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
PDXDC1-216ENST00000569715 MCM10Q7L590 875 aa14.2□□□□□ -0.14
PDXDC1-216ENST00000569715 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
PDXDC1-216ENST00000569715 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
PDXDC1-216ENST00000569715 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
PDXDC1-216ENST00000569715 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
PDXDC1-216ENST00000569715 KIAA0232Q92628 1395 aa14.19□□□□□ -0.14
PDXDC1-216ENST00000569715 RARSP54136 660 aaKnown RBP14.19□□□□□ -0.14
PDXDC1-216ENST00000569715 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
PDXDC1-216ENST00000569715 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
PDXDC1-216ENST00000569715 ERBB3P21860 1342 aa14.18□□□□□ -0.14
PDXDC1-216ENST00000569715 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
PDXDC1-216ENST00000569715 ZNF853P0CG23 659 aa14.18□□□□□ -0.14
PDXDC1-216ENST00000569715 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
PDXDC1-216ENST00000569715 MBIPQ9NS73 344 aa14.17□□□□□ -0.14
PDXDC1-216ENST00000569715 IFT57Q9NWB7 429 aa14.17□□□□□ -0.14
PDXDC1-216ENST00000569715 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
PDXDC1-216ENST00000569715 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
PDXDC1-216ENST00000569715 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
PDXDC1-216ENST00000569715 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
PDXDC1-216ENST00000569715 CPDO75976 1380 aa14.16□□□□□ -0.14
PDXDC1-216ENST00000569715 GNAI1P63096 354 aa14.16□□□□□ -0.14
PDXDC1-216ENST00000569715 CRB1P82279 1406 aa14.15□□□□□ -0.14
PDXDC1-216ENST00000569715 CFAP44Q96MT7 982 aa14.15□□□□□ -0.14
PDXDC1-216ENST00000569715 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms