RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 ANTXR1Q9H6X2 564 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
SPG7-220ENST00000569363 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
SPG7-220ENST00000569363 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
SPG7-220ENST00000569363 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
SPG7-220ENST00000569363 POLKQ9UBT6 870 aa10.08□□□□□ -0.8
SPG7-220ENST00000569363 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
SPG7-220ENST00000569363 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
SPG7-220ENST00000569363 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
SPG7-220ENST00000569363 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
SPG7-220ENST00000569363 FER1L4A9Z1Z3 1794 aa10.07□□□□□ -0.8
SPG7-220ENST00000569363 RIMS1Q86UR5 1692 aaKnown RBP10.07□□□□□ -0.8
SPG7-220ENST00000569363 FBXO31Q5XUX0 539 aaPredicted RBP10.07□□□□□ -0.8
SPG7-220ENST00000569363 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
SPG7-220ENST00000569363 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
SPG7-220ENST00000569363 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
SPG7-220ENST00000569363 HSCBQ8IWL3 235 aa10.06□□□□□ -0.8
SPG7-220ENST00000569363 API5Q9BZZ5 524 aaKnown RBP10.06□□□□□ -0.8
SPG7-220ENST00000569363 ZNF853P0CG23 659 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 IL13P35225 146 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 BMP2KLQ5H9B9 411 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
SPG7-220ENST00000569363 SNX21Q969T3 373 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 COG3Q96JB2 828 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 ZNF692Q9BU19 519 aaPredicted RBP10.05□□□□□ -0.8
SPG7-220ENST00000569363 TECPR2O15040 1411 aa10.05□□□□□ -0.8
SPG7-220ENST00000569363 VAMP4O75379 141 aa10.04□□□□□ -0.8
SPG7-220ENST00000569363 PTMSP20962 102 aa10.04□□□□□ -0.8
SPG7-220ENST00000569363 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
SPG7-220ENST00000569363 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
SPG7-220ENST00000569363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPG7-220ENST00000569363 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
SPG7-220ENST00000569363 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
SPG7-220ENST00000569363 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
SPG7-220ENST00000569363 CPS1P31327 1500 aa10.03□□□□□ -0.8
SPG7-220ENST00000569363 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
SPG7-220ENST00000569363 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
SPG7-220ENST00000569363 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
SPG7-220ENST00000569363 ABCC4O15439 1325 aa10.03□□□□□ -0.8
SPG7-220ENST00000569363 NRKQ7Z2Y5 1582 aa10.02□□□□□ -0.81
SPG7-220ENST00000569363 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
SPG7-220ENST00000569363 ITSN1Q15811 1721 aa10.02□□□□□ -0.81
SPG7-220ENST00000569363 AKAP12Q02952 1782 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 NCOA3Q9Y6Q9 1424 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 NRXN3Q9Y4C0 1643 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 MCM4P33991 863 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 TWISTNBQ3B726 338 aaPredicted RBP10.01□□□□□ -0.81
SPG7-220ENST00000569363 NUDT16Q96DE0 195 aaKnown RBP10.01□□□□□ -0.81
SPG7-220ENST00000569363 ESF1Q9H501 851 aaKnown RBP10.01□□□□□ -0.81
SPG7-220ENST00000569363 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
SPG7-220ENST00000569363 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
SPG7-220ENST00000569363 MAP2P11137 1827 aaKnown RBP10□□□□□ -0.81
SPG7-220ENST00000569363 C3P01024 1663 aa10□□□□□ -0.81
SPG7-220ENST00000569363 HMOX1P09601 288 aa10□□□□□ -0.81
SPG7-220ENST00000569363 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
SPG7-220ENST00000569363 FAM43AQ8N2R8 423 aa10□□□□□ -0.81
SPG7-220ENST00000569363 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
SPG7-220ENST00000569363 LNPKQ9C0E8 428 aa10□□□□□ -0.81
SPG7-220ENST00000569363 MBIPQ9NS73 344 aa10□□□□□ -0.81
SPG7-220ENST00000569363 NME9Q86XW9 330 aa9.99□□□□□ -0.81
SPG7-220ENST00000569363 EMILIN1Q9Y6C2 1016 aa9.99□□□□□ -0.81
SPG7-220ENST00000569363 KIAA0232Q92628 1395 aa9.99□□□□□ -0.81
SPG7-220ENST00000569363 CDC45O75419 566 aa9.98□□□□□ -0.81
SPG7-220ENST00000569363 INTS3Q68E01 1043 aaKnown RBP9.98□□□□□ -0.81
SPG7-220ENST00000569363 GBP4Q96PP9 640 aa9.98□□□□□ -0.81
SPG7-220ENST00000569363 METP08581 1390 aa9.98□□□□□ -0.81
SPG7-220ENST00000569363 GOLGA6L3A6NEY3 463 aa9.97□□□□□ -0.81
SPG7-220ENST00000569363 HSP90AB1P08238 724 aaKnown RBP9.97□□□□□ -0.81
SPG7-220ENST00000569363 SKOR2Q2VWA4 1001 aaPredicted RBP9.97□□□□□ -0.81
SPG7-220ENST00000569363 PTPRCP08575 1304 aa9.97□□□□□ -0.81
SPG7-220ENST00000569363 TTC21BQ7Z4L5 1316 aa9.97□□□□□ -0.81
SPG7-220ENST00000569363 TNRQ92752 1358 aa9.97□□□□□ -0.81
SPG7-220ENST00000569363 DDIT3P35638 169 aa9.96□□□□□ -0.82
SPG7-220ENST00000569363 TXNDC2Q86VQ3 553 aa9.96□□□□□ -0.82
SPG7-220ENST00000569363 RPAP2Q8IXW5 612 aaPredicted RBP9.96□□□□□ -0.82
SPG7-220ENST00000569363 TSPYL6Q8N831 410 aa9.96□□□□□ -0.82
SPG7-220ENST00000569363 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.82
SPG7-220ENST00000569363 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
SPG7-220ENST00000569363 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 TRAK2O60296 914 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 ANKRD44Q8N8A2 993 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 DCTPP1Q9H773 170 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 TOPAZ1Q8N9V7 1692 aa9.95□□□□□ -0.82
SPG7-220ENST00000569363 OVOS2A0A0J9YW53 1432 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 OVOS2Q6IE36 1432 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 ARHGEF10O15013 1369 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 PLEKHG1Q9ULL1 1385 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 K7ELQ4 463 aaPredicted RBP9.94□□□□□ -0.82
SPG7-220ENST00000569363 CHL1O00533 1208 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 MRE11P49959 708 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
SPG7-220ENST00000569363 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms