RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 GOLGA6L22H0YM25 854 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 FOXO3O43524 673 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 CDC45O75419 566 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 MRE11P49959 708 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 MEIS3Q99687 375 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 EXOC6BQ9Y2D4 811 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 ZGPATQ8N5A5 531 aaKnown RBP11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
HDGFL3-206ENST00000568294 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 BMP2KLQ5H9B9 411 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
HDGFL3-206ENST00000568294 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 ANP32BQ92688 251 aaKnown RBP11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 GLI2P10070 1586 aa11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
HDGFL3-206ENST00000568294 NSD2O96028 1365 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 FAM69CQ0P6D2 419 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 ALDH1L2Q3SY69 923 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 NUDT16Q96DE0 195 aaKnown RBP11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 KIF2CQ99661 725 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 SLC52A1Q9NWF4 448 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 YTHDC2Q9H6S0 1430 aaKnown RBP11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 ESPNB1AK53 854 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 NASPP49321 788 aaPredicted RBP11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
HDGFL3-206ENST00000568294 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
HDGFL3-206ENST00000568294 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
HDGFL3-206ENST00000568294 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
HDGFL3-206ENST00000568294 G2E3Q7L622 706 aa11.06□□□□□ -0.64
HDGFL3-206ENST00000568294 SDSP20132 328 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 SLC26A8Q96RN1 970 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 IL13P35225 146 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 UPF3BQ9BZI7 483 aaKnown RBP11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
HDGFL3-206ENST00000568294 IL16Q14005 1332 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 CASC1Q6TDU7 716 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 ANO2Q9NQ90 1003 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 NEK4P51957 841 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 CAMSAP1Q5T5Y3 1602 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 ABCC3O15438 1527 aa11.04□□□□□ -0.64
HDGFL3-206ENST00000568294 NRXN1Q9ULB1 1477 aa11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 RBM10P98175 930 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 FKBP5Q13451 457 aaPredicted RBP11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 TTC22Q5TAA0 569 aa11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 MSH6P52701 1360 aa11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 LRRC7Q96NW7 1537 aa11.03□□□□□ -0.64
HDGFL3-206ENST00000568294 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.64
HDGFL3-206ENST00000568294 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.64
HDGFL3-206ENST00000568294 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
HDGFL3-206ENST00000568294 LMOD3Q0VAK6 560 aa11.02□□□□□ -0.65
HDGFL3-206ENST00000568294 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
HDGFL3-206ENST00000568294 SNX21Q969T3 373 aa11.02□□□□□ -0.65
HDGFL3-206ENST00000568294 CHMP4BQ9H444 224 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-206ENST00000568294 ABCA9Q8IUA7 1624 aa11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 SYCE3A1L190 88 aa11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 MSNP26038 577 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 AMPHP49418 695 aa11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 CEP85Q6P2H3 762 aa11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 ST18O60284 1047 aa11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 HSP90AA2PQ14568 343 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-206ENST00000568294 PTMAP06454 111 aaKnown RBP11□□□□□ -0.65
HDGFL3-206ENST00000568294 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
HDGFL3-206ENST00000568294 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
HDGFL3-206ENST00000568294 FRMPD1Q5SYB0 1578 aa11□□□□□ -0.65
HDGFL3-206ENST00000568294 ANXA1P04083 346 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms