RNA–Protein interactions for RNA: ENST00000567949.5

CTU2-210, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-210ENST00000567949 RGPD1P0DJD0 1748 aa26.57■■□□□ 1.84
CTU2-210ENST00000567949 RARSP54136 660 aaKnown RBP26.56■■□□□ 1.84
CTU2-210ENST00000567949 PSME1Q06323 249 aa26.55■■□□□ 1.84
CTU2-210ENST00000567949 KIF24Q5T7B8 1368 aa26.55■■□□□ 1.84
CTU2-210ENST00000567949 CT47B1P0C2W7 299 aaPredicted RBP26.55■■□□□ 1.84
CTU2-210ENST00000567949 NUTM2GQ5VZR2 741 aa26.55■■□□□ 1.84
CTU2-210ENST00000567949 C19orf44Q9H6X5 657 aa26.55■■□□□ 1.84
CTU2-210ENST00000567949 KDM4FA0A1W2PPD8 638 aa26.54■■□□□ 1.84
CTU2-210ENST00000567949 TSR2Q969E8 191 aaKnown RBP26.54■■□□□ 1.84
CTU2-210ENST00000567949 AMPHP49418 695 aa26.53■■□□□ 1.84
CTU2-210ENST00000567949 HSPA2P54652 639 aa26.53■■□□□ 1.84
CTU2-210ENST00000567949 SULT6B1Q6IMI4 303 aa26.53■■□□□ 1.84
CTU2-210ENST00000567949 ORAI2Q96SN7 254 aa26.52■■□□□ 1.84
CTU2-210ENST00000567949 STRCP1A6NGW2 1772 aa26.51■■□□□ 1.84
CTU2-210ENST00000567949 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
CTU2-210ENST00000567949 ARHGEF10O15013 1369 aa26.51■■□□□ 1.83
CTU2-210ENST00000567949 AEBP1Q8IUX7 1158 aa26.51■■□□□ 1.83
CTU2-210ENST00000567949 CALD1Q05682 793 aaKnown RBP26.51■■□□□ 1.83
CTU2-210ENST00000567949 LMOD3Q0VAK6 560 aa26.51■■□□□ 1.83
CTU2-210ENST00000567949 C1orf167Q5SNV9 1468 aa26.5■■□□□ 1.83
CTU2-210ENST00000567949 EXOSC9Q06265 439 aaKnown RBP26.49■■□□□ 1.83
CTU2-210ENST00000567949 PDE3AQ14432 1141 aa26.49■■□□□ 1.83
CTU2-210ENST00000567949 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
CTU2-210ENST00000567949 TMEM94Q12767 1356 aa26.48■■□□□ 1.83
CTU2-210ENST00000567949 KIF1AQ12756 1690 aa26.48■■□□□ 1.83
CTU2-210ENST00000567949 LMTK3Q96Q04 1460 aa26.47■■□□□ 1.83
CTU2-210ENST00000567949 HOXC9P31274 260 aa26.47■■□□□ 1.83
CTU2-210ENST00000567949 DCCP43146 1447 aa26.46■■□□□ 1.83
CTU2-210ENST00000567949 FOXO3O43524 673 aa26.45■■□□□ 1.83
CTU2-210ENST00000567949 CANXP27824 592 aaKnown RBP26.45■■□□□ 1.83
CTU2-210ENST00000567949 RTL1A6NKG5 1358 aa26.45■■□□□ 1.83
CTU2-210ENST00000567949 NFAT5O94916 1531 aa26.44■■□□□ 1.82
CTU2-210ENST00000567949 KDRP35968 1356 aa26.44■■□□□ 1.82
CTU2-210ENST00000567949 IGSF1Q8N6C5 1336 aa26.44■■□□□ 1.82
CTU2-210ENST00000567949 THUMPD2Q9BTF0 503 aaKnown RBP26.43■■□□□ 1.82
CTU2-210ENST00000567949 IFT57Q9NWB7 429 aa26.43■■□□□ 1.82
CTU2-210ENST00000567949 ATF3P18847 181 aa26.43■■□□□ 1.82
CTU2-210ENST00000567949 GNAI1P63096 354 aa26.42■■□□□ 1.82
CTU2-210ENST00000567949 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
CTU2-210ENST00000567949 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
CTU2-210ENST00000567949 EYA1Q99502 592 aa26.42■■□□□ 1.82
CTU2-210ENST00000567949 MST1RQ04912 1400 aa26.42■■□□□ 1.82
CTU2-210ENST00000567949 ZNF853P0CG23 659 aa26.41■■□□□ 1.82
CTU2-210ENST00000567949 TRPM3Q9HCF6 1732 aaPredicted RBP26.41■■□□□ 1.82
CTU2-210ENST00000567949 LTN1O94822 1766 aa26.41■■□□□ 1.82
CTU2-210ENST00000567949 BCL2L13Q9BXK5 485 aa26.41■■□□□ 1.82
CTU2-210ENST00000567949 LAS1LQ9Y4W2 734 aaKnown RBP26.4■■□□□ 1.82
CTU2-210ENST00000567949 STRCQ7RTU9 1775 aa26.4■■□□□ 1.82
CTU2-210ENST00000567949 XPCQ01831 940 aaPredicted RBP26.39■■□□□ 1.81
CTU2-210ENST00000567949 KRT28Q7Z3Y7 464 aa26.39■■□□□ 1.81
CTU2-210ENST00000567949 FAM83GA6ND36 823 aa26.38■■□□□ 1.81
CTU2-210ENST00000567949 IP6K1Q92551 441 aa26.37■■□□□ 1.81
CTU2-210ENST00000567949 CFAP44Q96MT7 982 aa26.37■■□□□ 1.81
CTU2-210ENST00000567949 SLIT3O75094 1523 aa26.37■■□□□ 1.81
CTU2-210ENST00000567949 PANK1Q8TE04 598 aa26.37■■□□□ 1.81
CTU2-210ENST00000567949 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
CTU2-210ENST00000567949 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
CTU2-210ENST00000567949 SSH1Q8WYL5 1049 aa26.35■■□□□ 1.81
CTU2-210ENST00000567949 SMC4Q9NTJ3 1288 aa26.35■■□□□ 1.81
CTU2-210ENST00000567949 ZNF428Q96B54 188 aa26.35■■□□□ 1.81
CTU2-210ENST00000567949 MBIPQ9NS73 344 aa26.35■■□□□ 1.81
CTU2-210ENST00000567949 DCTN1Q14203 1278 aa26.34■■□□□ 1.81
CTU2-210ENST00000567949 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
CTU2-210ENST00000567949 ZKSCAN2Q63HK3 967 aa26.33■■□□□ 1.81
CTU2-210ENST00000567949 COG6Q9Y2V7 657 aa26.33■■□□□ 1.81
CTU2-210ENST00000567949 MSH6P52701 1360 aa26.33■■□□□ 1.81
CTU2-210ENST00000567949 USP19O94966 1318 aa26.33■■□□□ 1.81
CTU2-210ENST00000567949 KDM2BQ8NHM5 1336 aa26.32■■□□□ 1.8
CTU2-210ENST00000567949 GCP02774 474 aa26.32■■□□□ 1.8
CTU2-210ENST00000567949 MTHFSDQ2M296 383 aaKnown RBP26.31■■□□□ 1.8
CTU2-210ENST00000567949 LTV1Q96GA3 475 aaPredicted RBP26.31■■□□□ 1.8
CTU2-210ENST00000567949 MS4A1P11836 297 aa26.31■■□□□ 1.8
CTU2-210ENST00000567949 RLBP1P12271 317 aa26.31■■□□□ 1.8
CTU2-210ENST00000567949 GAS2L2Q8NHY3 880 aa26.3■■□□□ 1.8
CTU2-210ENST00000567949 TNNQ9UQP3 1299 aa26.3■■□□□ 1.8
CTU2-210ENST00000567949 ALS2Q96Q42 1657 aa26.3■■□□□ 1.8
CTU2-210ENST00000567949 XIRP1Q702N8 1843 aaKnown RBP26.3■■□□□ 1.8
CTU2-210ENST00000567949 AAMPQ13685 434 aa26.29■■□□□ 1.8
CTU2-210ENST00000567949 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
CTU2-210ENST00000567949 RBM19Q9Y4C8 960 aaKnown RBP26.29■■□□□ 1.8
CTU2-210ENST00000567949 VAMP4O75379 141 aa26.29■■□□□ 1.8
CTU2-210ENST00000567949 CENPQQ7L2Z9 268 aaPredicted RBP26.29■■□□□ 1.8
CTU2-210ENST00000567949 MCM10Q7L590 875 aa26.28■■□□□ 1.8
CTU2-210ENST00000567949 ARHGEF25Q86VW2 580 aa26.28■■□□□ 1.8
CTU2-210ENST00000567949 BRPF1P55201 1214 aaPredicted RBP26.27■■□□□ 1.8
CTU2-210ENST00000567949 KIF16BQ96L93 1317 aa26.27■■□□□ 1.8
CTU2-210ENST00000567949 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
CTU2-210ENST00000567949 CLUAP1Q96AJ1 413 aa26.27■■□□□ 1.8
CTU2-210ENST00000567949 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
CTU2-210ENST00000567949 CHL1O00533 1208 aa26.26■■□□□ 1.79
CTU2-210ENST00000567949 NOB1Q9ULX3 412 aaKnown RBP26.26■■□□□ 1.79
CTU2-210ENST00000567949 CRB1P82279 1406 aa26.25■■□□□ 1.79
CTU2-210ENST00000567949 ATF7IPQ6VMQ6 1270 aa26.25■■□□□ 1.79
CTU2-210ENST00000567949 NPHP3Q7Z494 1330 aa26.25■■□□□ 1.79
CTU2-210ENST00000567949 ZBTB7CA1YPR0 619 aa26.24■■□□□ 1.79
CTU2-210ENST00000567949 IPO8O15397 1037 aaKnown RBP26.24■■□□□ 1.79
CTU2-210ENST00000567949 HTATSF1O43719 755 aaKnown RBP26.24■■□□□ 1.79
CTU2-210ENST00000567949 TRIM27P14373 513 aa26.24■■□□□ 1.79
CTU2-210ENST00000567949 FTSJ3Q8IY81 847 aaKnown RBP26.24■■□□□ 1.79
CTU2-210ENST00000567949 RTF1Q92541 710 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms