RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 IL13P35225 146 aa11.79□□□□□ -0.52
BBS4-210ENST00000566400 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
BBS4-210ENST00000566400 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
BBS4-210ENST00000566400 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
BBS4-210ENST00000566400 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
BBS4-210ENST00000566400 MLECQ14165 292 aa11.78□□□□□ -0.52
BBS4-210ENST00000566400 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
BBS4-210ENST00000566400 C3P01024 1663 aa11.78□□□□□ -0.52
BBS4-210ENST00000566400 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.52
BBS4-210ENST00000566400 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
BBS4-210ENST00000566400 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.53
BBS4-210ENST00000566400 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
BBS4-210ENST00000566400 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.53
BBS4-210ENST00000566400 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 TBC1D32Q96NH3 1257 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 USP19O94966 1318 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 PIK3R4Q99570 1358 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
BBS4-210ENST00000566400 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
BBS4-210ENST00000566400 NRKQ7Z2Y5 1582 aa11.75□□□□□ -0.53
BBS4-210ENST00000566400 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
BBS4-210ENST00000566400 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
BBS4-210ENST00000566400 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
BBS4-210ENST00000566400 NME9Q86XW9 330 aa11.74□□□□□ -0.53
BBS4-210ENST00000566400 VAMP4O75379 141 aa11.74□□□□□ -0.53
BBS4-210ENST00000566400 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
BBS4-210ENST00000566400 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
BBS4-210ENST00000566400 GSE1Q14687 1217 aa11.73□□□□□ -0.53
BBS4-210ENST00000566400 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
BBS4-210ENST00000566400 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
BBS4-210ENST00000566400 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
BBS4-210ENST00000566400 HMOX1P09601 288 aa11.72□□□□□ -0.53
BBS4-210ENST00000566400 NUCB1Q02818 461 aa11.72□□□□□ -0.53
BBS4-210ENST00000566400 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
BBS4-210ENST00000566400 ADAMTS13Q76LX8 1427 aa11.72□□□□□ -0.53
BBS4-210ENST00000566400 TTC21AQ8NDW8 1320 aa11.72□□□□□ -0.53
BBS4-210ENST00000566400 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
BBS4-210ENST00000566400 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
BBS4-210ENST00000566400 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
BBS4-210ENST00000566400 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
BBS4-210ENST00000566400 ABCC4O15439 1325 aa11.71□□□□□ -0.54
BBS4-210ENST00000566400 SOCS7O14512 581 aa11.71□□□□□ -0.54
BBS4-210ENST00000566400 MBIPQ9NS73 344 aa11.71□□□□□ -0.54
BBS4-210ENST00000566400 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
BBS4-210ENST00000566400 SEC24BO95487 1268 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 ADRA2BP18089 450 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 USP6P35125 1406 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 HSPA2P54652 639 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 CHD1LQ86WJ1 897 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 SLIT1O75093 1534 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 ROBO2Q9HCK4 1378 aa11.7□□□□□ -0.54
BBS4-210ENST00000566400 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
BBS4-210ENST00000566400 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
BBS4-210ENST00000566400 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
BBS4-210ENST00000566400 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
BBS4-210ENST00000566400 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
BBS4-210ENST00000566400 ACEP12821 1306 aa11.68□□□□□ -0.54
BBS4-210ENST00000566400 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
BBS4-210ENST00000566400 ARHGAP23Q9P227 1491 aa11.67□□□□□ -0.54
BBS4-210ENST00000566400 LTBP4Q8N2S1 1624 aa11.67□□□□□ -0.54
BBS4-210ENST00000566400 PTPRCP08575 1304 aa11.67□□□□□ -0.54
BBS4-210ENST00000566400 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
BBS4-210ENST00000566400 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
BBS4-210ENST00000566400 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
BBS4-210ENST00000566400 EIF4A2Q14240 407 aaKnown RBP11.66□□□□□ -0.54
BBS4-210ENST00000566400 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
BBS4-210ENST00000566400 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
BBS4-210ENST00000566400 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
BBS4-210ENST00000566400 CHL1O00533 1208 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 FBLN1P23142 703 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 INTS3Q68E01 1043 aaKnown RBP11.65□□□□□ -0.54
BBS4-210ENST00000566400 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
BBS4-210ENST00000566400 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 ANKARQ7Z5J8 1434 aa11.65□□□□□ -0.54
BBS4-210ENST00000566400 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.55
BBS4-210ENST00000566400 SBNO1A3KN83 1393 aa11.65□□□□□ -0.55
BBS4-210ENST00000566400 RGPD1P0DJD0 1748 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 TSPYL6Q8N831 410 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 FLT4P35916 1363 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 HTATSF1O43719 755 aaKnown RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 SNX21Q969T3 373 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
BBS4-210ENST00000566400 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
BBS4-210ENST00000566400 PTPRUQ92729 1446 aa11.63□□□□□ -0.55
BBS4-210ENST00000566400 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms